RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 A4GALTQ9NPC4 353 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 SLC52A3Q9NQ40 469 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 PDRG1Q9NUG6 133 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 EXOC1Q9NV70 894 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 SEPT10Q9P0V9 454 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 ARMCX3Q9UH62 379 aaPredicted RBP2.28□□□□□ -2.04
COPS3-213ENST00000577210 PA2G4Q9UQ80 394 aaKnown RBP2.28□□□□□ -2.04
COPS3-213ENST00000577210 SELENOKQ9Y6D0 94 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 EVPLQ92817 2033 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 GPRASP1Q5JY77 1395 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 OOEPA6NGQ2 149 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 CASTOR2A6NHX0 329 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 C2CD4DB7Z1M9 353 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 PI4K2BG5E9Z4 385 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 ZNF197O14709 1029 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 KERAO60938 352 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 RAD51DO75771 328 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 ATP6AP2O75787 350 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 CDC123O75794 336 aaPredicted RBP2.27□□□□□ -2.05
COPS3-213ENST00000577210 FRMD6-AS1P0C7T7 363 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 TRIM49P0CI25 452 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 TRIM49CP0CI26 452 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 SLC2A2P11168 524 aaPredicted RBP2.27□□□□□ -2.05
COPS3-213ENST00000577210 KRT3P12035 628 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 JAK1P23458 1154 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 MPZP25189 248 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 HLA-FP30511 346 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 OR3A3P47888 321 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 CDX1P47902 265 aaPredicted RBP2.27□□□□□ -2.05
COPS3-213ENST00000577210 HUNKP57058 714 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 GSDMDP57764 484 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 SNRPD1P62314 119 aaKnown RBP2.27□□□□□ -2.05
COPS3-213ENST00000577210 TAF10Q12962 218 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 P2RY6Q15077 328 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 PTGISQ16647 500 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 SMU1Q2TAY7 513 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 FUT11Q495W5 492 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 ZRANB3Q5FWF4 1079 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 FUT10Q6P4F1 479 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 ALKBH5Q6P6C2 394 aaKnown RBP2.27□□□□□ -2.05
COPS3-213ENST00000577210 CTR9Q6PD62 1173 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 FIP1L1Q6UN15 594 aaKnown RBP2.27□□□□□ -2.05
COPS3-213ENST00000577210 GSG1LQ6UXU4 331 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 MACC1Q6ZN28 852 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 GBP6Q6ZN66 633 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 FAM43BQ6ZT52 329 aaPredicted RBP2.27□□□□□ -2.05
COPS3-213ENST00000577210 FCRLAQ7L513 359 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 SLC16A9Q7RTY1 509 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 NRARPQ7Z6K4 114 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 RTN4RL2Q86UN3 420 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 PIGZQ86VD9 579 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 HOOK3Q86VS8 718 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 FAM219AQ8IW50 185 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 MMD2Q8IY49 270 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 KIRREL3Q8IZU9 778 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 C10orf53Q8N6V4 93 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 BMPERQ8N8U9 685 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 SPC24Q8NBT2 197 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 TRIM58Q8NG06 486 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 OR11H4Q8NGC9 324 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 SPATA3Q8NHX4 192 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 VANGL1Q8TAA9 524 aaPredicted RBP2.27□□□□□ -2.05
COPS3-213ENST00000577210 UBLCP1Q8WVY7 318 aaPredicted RBP2.27□□□□□ -2.05
COPS3-213ENST00000577210 RAD54LQ92698 747 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 PTP4A1Q93096 173 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 MR1Q95460 341 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 WBP2Q969T9 261 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 CDHR1Q96JP9 859 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 CABS1Q96KC9 395 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 FAM20AQ96MK3 541 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 PGLYRP2Q96PD5 576 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 BTBD9Q96Q07 612 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 CDCA3Q99618 268 aaPredicted RBP2.27□□□□□ -2.05
COPS3-213ENST00000577210 LPAR4Q99677 370 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 FUCA2Q9BTY2 467 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 MLPHQ9BV36 600 aaPredicted RBP2.27□□□□□ -2.05
COPS3-213ENST00000577210 ACAT2Q9BWD1 397 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 FUT8Q9BYC5 575 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 TRIM7Q9C029 511 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 NYXQ9GZU5 481 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 FZD8Q9H461 694 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 TLE6Q9H808 572 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 RNF121Q9H920 327 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 ZDHHC18Q9NUE0 388 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 INTS9Q9NV88 658 aaKnown RBP2.27□□□□□ -2.05
COPS3-213ENST00000577210 IL36AQ9UHA7 158 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 ELF5Q9UKW6 265 aaPredicted RBP2.27□□□□□ -2.05
COPS3-213ENST00000577210 CDH7Q9ULB5 785 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 RNF150Q9ULK6 438 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 GAB2Q9UQC2 676 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 TNNQ9UQP3 1299 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 WDR83OSQ9Y284 106 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 TMED3Q9Y3Q3 217 aa2.27□□□□□ -2.05
COPS3-213ENST00000577210 NPHP3Q7Z494 1330 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 CKAP5Q14008 2032 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 A0A1W2PRV1 198 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 MEIOCA2RUB1 952 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 SMIM30A4D0T7 59 aa2.26□□□□□ -2.05
COPS3-213ENST00000577210 GTPBP10A4D1E9 387 aaKnown RBP2.26□□□□□ -2.05
COPS3-213ENST00000577210 PRR23AA6NEV1 266 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms