RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 GABRA4P48169 554 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 KCNC1P48547 511 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 IRF9Q00978 393 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 MC2RQ01718 297 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 EIF3IQ13347 325 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 OR4D1Q15615 310 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 GPR19Q15760 415 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 CYP2A13Q16696 494 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 DEFB110Q30KQ9 67 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 C18orf21Q32NC0 220 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 ZBTB37Q5TC79 503 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 KIAA1614Q5VZ46 1190 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 FCRL6Q6DN72 434 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 CDPF1Q6NVV7 123 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 CDHR3Q6ZTQ4 885 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 TIPARPQ7Z3E1 657 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 ZFAND4Q86XD8 727 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 FBXO15Q8NCQ5 510 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 OR2A1Q8NGT9 310 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 OR9A1PQ8NGU1 263 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 HMGCLL1Q8TB92 370 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 DCAKDQ8WVC6 231 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 RAD51AP1Q96B01 352 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 PTERQ96BW5 349 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 ZDHHC12Q96GR4 267 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 NAF1Q96HR8 494 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 FCRL4Q96PJ5 515 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 OR6C1Q96RD1 312 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 CMKLR1Q99788 373 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 SLC12A9Q9BXP2 914 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 SPRY4Q9C004 299 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 OR6C2Q9NZP2 312 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 POLR3KQ9Y2Y1 108 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 BSNQ9UPA5 3926 aa9.11□□□□□ -0.95
NPLOC4-219ENST00000576713 APC2O95996 2303 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 PRAMEF27A3QJZ7 478 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 ISM1B1AKI9 464 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 B4E171 279 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 E7ENX8 843 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 TMX2-CTNND1H3BSU7 103 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 EIF3FO00303 357 aaPredicted RBP9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 TOX3O15405 576 aaPredicted RBP9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 ZBTB14O43829 449 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 SYF2O95926 243 aaKnown RBP9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 CATP04040 527 aaKnown RBP9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 ALDOAP04075 364 aaKnown RBP9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 SHBGP04278 402 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 RPN2P04844 631 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 WT1P19544 449 aaPredicted RBP9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 MAGP20916 626 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 CDH3P22223 829 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 ITPKBP27987 946 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 CCNFP41002 786 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 TSPAN7P41732 249 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 PMS2P54278 862 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 PNLIPRP1P54315 467 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 IL2P60568 153 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 POU4F1Q01851 419 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 TAP2Q03519 686 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 SLC29A2Q14542 456 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 USP10Q14694 798 aaKnown RBP9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 SLMAPQ14BN4 828 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 TSNQ15631 228 aaKnown RBP9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 ERCC6LQ2NKX8 1250 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 GRTP1Q5TC63 336 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 MROH9Q5TGP6 573 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 KLHL35Q6PF15 583 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 CENPLQ8N0S6 344 aaPredicted RBP9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 D2HGDHQ8N465 521 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 SLC38A9Q8NBW4 561 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 GABPB2Q8TAK5 448 aaPredicted RBP9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 SLC44A1Q8WWI5 657 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 UBXN4Q92575 508 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 CDKL2Q92772 493 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 TP53INP1Q96A56 240 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 ZNF501Q96CX3 271 aaPredicted RBP9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 PDLIM5Q96HC4 596 aaKnown RBP9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 UBXN10Q96LJ8 280 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 CYTH2Q99418 400 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 CD180Q99467 661 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 PAFAH2Q99487 392 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 MIPEPQ99797 713 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 DHRS4Q9BTZ2 278 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 ACAT2Q9BWD1 397 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 WNT10AQ9GZT5 417 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 AKIRIN1Q9H9L7 192 aaPredicted RBP9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 SLC6A20Q9NP91 592 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 C1GALT1Q9NS00 363 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 NSMCE4AQ9NXX6 385 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 SLC39A1Q9NY26 324 aa9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 UTP6Q9NYH9 597 aaKnown RBP9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 STOX2Q9P2F5 926 aaPredicted RBP9.1□□□□□ -0.95
NPLOC4-219ENST00000576713 A0A0J9YY10 115 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 POC1B-GALNT4F8VUJ3 575 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 NVLO15381 856 aaKnown RBP9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 KALRNO60229 2985 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 CTSVO60911 334 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 ZBTB11O95625 1053 aaPredicted RBP9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 CCDC166P0CW27 439 aa9.09□□□□□ -0.95
NPLOC4-219ENST00000576713 CD1DP15813 335 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms