RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 FAM53CQ9NYF3 392 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 SMARCAL1Q9NZC9 954 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 CIDEBQ9UHD4 219 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 PLAGL1Q9UM63 463 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 PLA2G2DQ9UNK4 145 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 ICKQ9UPZ9 632 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 BTRCQ9Y297 605 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 KLHL20Q9Y2M5 609 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 COA3Q9Y2R0 106 aaPredicted RBP6.01□□□□□ -1.45
NUP88-212ENST00000576708 RNF114Q9Y508 228 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 X6R8D5 127 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 RELNP78509 3460 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 hCG_2014768A0A024R1R8 64 aa6□□□□□ -1.45
NUP88-212ENST00000576708 IGLV3-16A0A075B6K0 115 aa6□□□□□ -1.45
NUP88-212ENST00000576708 TRBV5-4A0A0C4DH59 114 aa6□□□□□ -1.45
NUP88-212ENST00000576708 MYOCOSA0A1B0GUC4 107 aa6□□□□□ -1.45
NUP88-212ENST00000576708 C17orf113A0A1B0GUU1 675 aa6□□□□□ -1.45
NUP88-212ENST00000576708 CCDC162PA2VCL2 907 aa6□□□□□ -1.45
NUP88-212ENST00000576708 H7BY64 318 aa6□□□□□ -1.45
NUP88-212ENST00000576708 IFRD1O00458 451 aaPredicted RBP6□□□□□ -1.45
NUP88-212ENST00000576708 ZNF749O43361 778 aa6□□□□□ -1.45
NUP88-212ENST00000576708 OR1I1O60431 355 aa6□□□□□ -1.45
NUP88-212ENST00000576708 TMEM63AO94886 807 aa6□□□□□ -1.45
NUP88-212ENST00000576708 TJP3O95049 919 aa6□□□□□ -1.45
NUP88-212ENST00000576708 FTCDO95954 541 aa6□□□□□ -1.45
NUP88-212ENST00000576708 KLK3P07288 261 aaPredicted RBP6□□□□□ -1.45
NUP88-212ENST00000576708 CYP2A7P20853 494 aa6□□□□□ -1.45
NUP88-212ENST00000576708 GRK2P25098 689 aa6□□□□□ -1.45
NUP88-212ENST00000576708 OTX2P32243 289 aa6□□□□□ -1.45
NUP88-212ENST00000576708 GRK3P35626 688 aa6□□□□□ -1.45
NUP88-212ENST00000576708 GRIA1P42261 906 aa6□□□□□ -1.45
NUP88-212ENST00000576708 ZNF75DP51815 510 aa6□□□□□ -1.45
NUP88-212ENST00000576708 PGDP52209 483 aa6□□□□□ -1.45
NUP88-212ENST00000576708 PRR5P85299 388 aa6□□□□□ -1.45
NUP88-212ENST00000576708 ATP1A4Q13733 1029 aa6□□□□□ -1.45
NUP88-212ENST00000576708 BOP1Q14137 746 aaKnown RBP6□□□□□ -1.45
NUP88-212ENST00000576708 SLC9A5Q14940 896 aa6□□□□□ -1.45
NUP88-212ENST00000576708 KCTD19Q17RG1 926 aaPredicted RBP6□□□□□ -1.45
NUP88-212ENST00000576708 PARP6Q2NL67 630 aa6□□□□□ -1.45
NUP88-212ENST00000576708 PLEKHN1Q494U1 663 aaPredicted RBP6□□□□□ -1.45
NUP88-212ENST00000576708 GPR33Q49SQ1 333 aa6□□□□□ -1.45
NUP88-212ENST00000576708 MLIPQ5VWP3 458 aa6□□□□□ -1.45
NUP88-212ENST00000576708 IZUMO3Q5VZ72 239 aa6□□□□□ -1.45
NUP88-212ENST00000576708 ARHGEF18Q6ZSZ5 1173 aa6□□□□□ -1.45
NUP88-212ENST00000576708 AMIGO1Q86WK6 493 aa6□□□□□ -1.45
NUP88-212ENST00000576708 KLHDC8BQ8IXV7 354 aa6□□□□□ -1.45
NUP88-212ENST00000576708 SYTL1Q8IYJ3 562 aa6□□□□□ -1.45
NUP88-212ENST00000576708 Q8N1Y9 231 aa6□□□□□ -1.45
NUP88-212ENST00000576708 FAM26EQ8N5C1 309 aa6□□□□□ -1.45
NUP88-212ENST00000576708 C2orf73Q8N5S3 287 aaPredicted RBP6□□□□□ -1.45
NUP88-212ENST00000576708 Q8NA96 180 aa6□□□□□ -1.45
NUP88-212ENST00000576708 OR52K1Q8NGK4 314 aa6□□□□□ -1.45
NUP88-212ENST00000576708 OR8K5Q8NH50 307 aa6□□□□□ -1.45
NUP88-212ENST00000576708 CPT1CQ8TCG5 803 aa6□□□□□ -1.45
NUP88-212ENST00000576708 ATG4AQ8WYN0 398 aa6□□□□□ -1.45
NUP88-212ENST00000576708 CPT1BQ92523 772 aa6□□□□□ -1.45
NUP88-212ENST00000576708 ELMO1Q92556 727 aa6□□□□□ -1.45
NUP88-212ENST00000576708 TFGQ92734 400 aaPredicted RBP6□□□□□ -1.45
NUP88-212ENST00000576708 MAGEB10Q96LZ2 347 aaPredicted RBP6□□□□□ -1.45
NUP88-212ENST00000576708 LRFN5Q96NI6 719 aa6□□□□□ -1.45
NUP88-212ENST00000576708 DESI2Q9BSY9 194 aa6□□□□□ -1.45
NUP88-212ENST00000576708 TMEM121Q9BTD3 319 aa6□□□□□ -1.45
NUP88-212ENST00000576708 NUDT9Q9BW91 350 aa6□□□□□ -1.45
NUP88-212ENST00000576708 SGPP1Q9BX95 441 aa6□□□□□ -1.45
NUP88-212ENST00000576708 PITPNM3Q9BZ71 974 aa6□□□□□ -1.45
NUP88-212ENST00000576708 TFB2MQ9H5Q4 396 aaKnown RBP6□□□□□ -1.45
NUP88-212ENST00000576708 MLXIPLQ9NP71 852 aa6□□□□□ -1.45
NUP88-212ENST00000576708 NLE1Q9NVX2 485 aaPredicted RBP6□□□□□ -1.45
NUP88-212ENST00000576708 SLC2A6Q9UGQ3 507 aa6□□□□□ -1.45
NUP88-212ENST00000576708 SNX7Q9UNH6 387 aa6□□□□□ -1.45
NUP88-212ENST00000576708 TDRKHQ9Y2W6 561 aaKnown RBP6□□□□□ -1.45
NUP88-212ENST00000576708 HEBP2Q9Y5Z4 205 aa6□□□□□ -1.45
NUP88-212ENST00000576708 COMMD10Q9Y6G5 202 aa6□□□□□ -1.45
NUP88-212ENST00000576708 SPTA1P02549 2419 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 KLHL33A6NCF5 533 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 MROH6A6NGR9 719 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 C2orf74A8MZ97 194 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 E7EQ34 232 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 H7C0S8 307 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 KRT86O43790 486 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 CNOT3O75175 753 aaKnown RBP5.99□□□□□ -1.45
NUP88-212ENST00000576708 SEMA7AO75326 666 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 VPS4BO75351 444 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 CEACAM4O75871 244 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 CHRM5P08912 532 aaPredicted RBP5.99□□□□□ -1.45
NUP88-212ENST00000576708 RAB40ALP0C0E4 278 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 GP1BBP13224 206 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 ETS1P14921 441 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 UGT2B7P16662 529 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 MSNP26038 577 aaKnown RBP5.99□□□□□ -1.45
NUP88-212ENST00000576708 ACADLP28330 430 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 PEBP1P30086 187 aaKnown RBP5.99□□□□□ -1.45
NUP88-212ENST00000576708 FOXN2P32314 431 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 HADHAP40939 763 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 GABRA4P48169 554 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 CD151P48509 253 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 VAV2P52735 878 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 GSDMDP57764 484 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 SRSF3P84103 164 aaKnown RBP5.99□□□□□ -1.45
NUP88-212ENST00000576708 CACNG1Q06432 222 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms