RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 ZNF304Q9HCX3 659 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 ENAMQ9NRM1 1142 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 TRMT6Q9UJA5 497 aaKnown RBP11.33□□□□□ -0.6
LITAF-219ENST00000576334 PSAT1Q9Y617 370 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 SAR1BQ9Y6B6 198 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 TEX264Q9Y6I9 313 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 USP9XQ93008 2570 aaPredicted RBP11.32□□□□□ -0.6
LITAF-219ENST00000576334 A0A0A6YYC8 382 aaPredicted RBP11.32□□□□□ -0.6
LITAF-219ENST00000576334 FEZF1A0PJY2 475 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 I3L1I5 382 aaPredicted RBP11.32□□□□□ -0.6
LITAF-219ENST00000576334 FOXS1O43638 330 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 FKBP9O95302 570 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 TSPAN12O95859 305 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 ZGLP1P0C6A0 271 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 ENO3P13929 434 aaPredicted RBP11.32□□□□□ -0.6
LITAF-219ENST00000576334 MMP11P24347 488 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 RPL21P46778 160 aaKnown RBP11.32□□□□□ -0.6
LITAF-219ENST00000576334 MAT1AQ00266 395 aaKnown RBP11.32□□□□□ -0.6
LITAF-219ENST00000576334 MYBPC3Q14896 1274 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 INPP5JQ15735 1006 aaPredicted RBP11.32□□□□□ -0.6
LITAF-219ENST00000576334 HIF1AQ16665 826 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 FAM214AQ32MH5 1076 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 FAAH2Q6GMR7 532 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 TMEM207Q6UWW9 146 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 CAPN12Q6ZSI9 719 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 CNTN4Q8IWV2 1026 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 LMNTD2Q8IXW0 634 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 AMER3Q8N944 861 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 GPATCH11Q8N954 259 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 CLEC1AQ8NC01 280 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 FBXO15Q8NCQ5 510 aaPredicted RBP11.32□□□□□ -0.6
LITAF-219ENST00000576334 OR11G2Q8NGC1 345 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 ANP32BQ92688 251 aaKnown RBP11.32□□□□□ -0.6
LITAF-219ENST00000576334 LINGO1Q96FE5 620 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 FER1L6-AS2Q96M78 137 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 CCDC138Q96M89 665 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 KRT12Q99456 494 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 CRB3Q9BUF7 120 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 YIPF2Q9BWQ6 316 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 WDR54Q9H977 334 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 MAP10Q9P2G4 905 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 KLHL42Q9P2K6 505 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 SNX24Q9Y343 169 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 MAP4K5Q9Y4K4 846 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 COMMD10Q9Y6G5 202 aa11.32□□□□□ -0.6
LITAF-219ENST00000576334 OR2W5A6NFC9 320 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 LCMT2O60294 686 aaKnown RBP11.31□□□□□ -0.6
LITAF-219ENST00000576334 DPM1O60762 260 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 JRKO75564 520 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 SEC31AO94979 1220 aaKnown RBP11.31□□□□□ -0.6
LITAF-219ENST00000576334 TTC4O95801 387 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 ALBP02768 609 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 CELA2AP08217 269 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 SAT1P21673 171 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 FBLP22087 321 aaKnown RBP11.31□□□□□ -0.6
LITAF-219ENST00000576334 ITGA3P26006 1051 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 MEF2AQ02078 507 aaPredicted RBP11.31□□□□□ -0.6
LITAF-219ENST00000576334 MRPL49Q13405 166 aaKnown RBP11.31□□□□□ -0.6
LITAF-219ENST00000576334 NAE1Q13564 534 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 UBAP2LQ14157 1087 aaKnown RBP11.31□□□□□ -0.6
LITAF-219ENST00000576334 ZNF460Q14592 562 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 MORF4L2Q15014 288 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 RBBP7Q16576 425 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 MUM1Q2TAK8 710 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 VWA5B1Q5TIE3 1220 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 HECTD2Q5U5R9 776 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 YOD1Q5VVQ6 348 aaPredicted RBP11.31□□□□□ -0.6
LITAF-219ENST00000576334 PRAMEF13Q5VWM6 474 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 VN1R4Q7Z5H5 301 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 PCGF5Q86SE9 256 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 PYCR2Q96C36 320 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 MMABQ96EY8 250 aaPredicted RBP11.31□□□□□ -0.6
LITAF-219ENST00000576334 ATP13A2Q9NQ11 1180 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 SLAMF7Q9NQ25 335 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 TAS2R13Q9NYV9 303 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 TRPC4Q9UBN4 977 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 C3orf18Q9UK00 162 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 LRRK2Q5S007 2527 aa11.31□□□□□ -0.6
LITAF-219ENST00000576334 SCN2AQ99250 2005 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 NBPF19A0A087WUL8 3843 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 CTAGE15A4D2H0 777 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 CLEC18AA5D8T8 446 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 TCP11X1B4DZS4 312 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 CD63P08962 238 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 RNF224P0DH78 156 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 PIM1P11309 404 aaPredicted RBP11.3□□□□□ -0.6
LITAF-219ENST00000576334 CDH1P12830 882 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 EZRP15311 586 aaKnown RBP11.3□□□□□ -0.6
LITAF-219ENST00000576334 FDXRP22570 491 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 HSD17B2P37059 387 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 BCL6P41182 706 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 EEF1A2Q05639 463 aaKnown RBP11.3□□□□□ -0.6
LITAF-219ENST00000576334 PDIA2Q13087 525 aaKnown RBP11.3□□□□□ -0.6
LITAF-219ENST00000576334 STEAP4Q687X5 459 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 AGTRAPQ6RW13 159 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 CLEC18BQ6UXF7 455 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 CTAGE6Q86UF2 777 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 PDIK1LQ8N165 341 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 MYO1HQ8N1T3 1032 aa11.3□□□□□ -0.6
LITAF-219ENST00000576334 CISD2Q8N5K1 135 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms