RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 TLK1Q9UKI8 766 aa14.59□□□□□ -0.07
SMG6-220ENST00000576218 MTO1Q9Y2Z2 717 aaKnown RBP14.59□□□□□ -0.07
SMG6-220ENST00000576218 DYRK1BQ9Y463 629 aa14.59□□□□□ -0.07
SMG6-220ENST00000576218 KCNMB2Q9Y691 235 aa14.59□□□□□ -0.07
SMG6-220ENST00000576218 PIEZO2Q9H5I5 2752 aa14.59□□□□□ -0.07
SMG6-220ENST00000576218 H3BMH7 237 aa14.58□□□□□ -0.08
SMG6-220ENST00000576218 PEX12O00623 359 aa14.58□□□□□ -0.08
SMG6-220ENST00000576218 PHGDHO43175 533 aaKnown RBP14.58□□□□□ -0.08
SMG6-220ENST00000576218 ANXA5P08758 320 aa14.58□□□□□ -0.08
SMG6-220ENST00000576218 RPS15AP62244 130 aaKnown RBP14.58□□□□□ -0.08
SMG6-220ENST00000576218 NAB1Q13506 487 aa14.58□□□□□ -0.08
SMG6-220ENST00000576218 CYS1Q717R9 158 aa14.58□□□□□ -0.08
SMG6-220ENST00000576218 PLD3Q8IV08 490 aa14.58□□□□□ -0.08
SMG6-220ENST00000576218 CEP97Q8IW35 865 aa14.58□□□□□ -0.08
SMG6-220ENST00000576218 PYCR2Q96C36 320 aa14.58□□□□□ -0.08
SMG6-220ENST00000576218 PDLIM5Q96HC4 596 aaKnown RBP14.58□□□□□ -0.08
SMG6-220ENST00000576218 FMO2Q99518 471 aa14.58□□□□□ -0.08
SMG6-220ENST00000576218 UNKQ9C0B0 810 aaKnown RBP14.58□□□□□ -0.08
SMG6-220ENST00000576218 SLC25A18Q9H1K4 315 aa14.58□□□□□ -0.08
SMG6-220ENST00000576218 PRM3Q9NNZ6 103 aa14.58□□□□□ -0.08
SMG6-220ENST00000576218 TMEM184CQ9NVA4 438 aa14.58□□□□□ -0.08
SMG6-220ENST00000576218 TUBD1Q9UJT1 453 aa14.58□□□□□ -0.08
SMG6-220ENST00000576218 NOVA2Q9UNW9 492 aaKnown RBP14.58□□□□□ -0.08
SMG6-220ENST00000576218 MAU2Q9Y6X3 613 aa14.58□□□□□ -0.08
SMG6-220ENST00000576218 ATRXP46100 2492 aa14.58□□□□□ -0.08
SMG6-220ENST00000576218 IGKV1-8A0A0C4DH67 115 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 FITM1A5D6W6 292 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 NCF1BA6NI72 391 aaPredicted RBP14.57□□□□□ -0.08
SMG6-220ENST00000576218 NCF1CA8MVU1 366 aaPredicted RBP14.57□□□□□ -0.08
SMG6-220ENST00000576218 CDC7O00311 574 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 PRPF4O43172 522 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMG6-220ENST00000576218 S100BP04271 92 aaPredicted RBP14.57□□□□□ -0.08
SMG6-220ENST00000576218 CCDC166P0CW27 439 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 CDH1P12830 882 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 NCF1P14598 390 aaPredicted RBP14.57□□□□□ -0.08
SMG6-220ENST00000576218 FBLP22087 321 aaKnown RBP14.57□□□□□ -0.08
SMG6-220ENST00000576218 OR1D4P47884 311 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 PMS2P54278 862 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 RRADP55042 308 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 OCA2Q04671 838 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 NDUFA9Q16795 377 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 ZNF385CQ66K41 422 aaPredicted RBP14.57□□□□□ -0.08
SMG6-220ENST00000576218 ZNF425Q6IV72 752 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 FBXO42Q6P3S6 717 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 LCTLQ6UWM7 567 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 TMEM207Q6UWW9 146 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 PRICKLE2Q7Z3G6 844 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 ZNF605Q86T29 641 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 LRRC56Q8IYG6 542 aaPredicted RBP14.57□□□□□ -0.08
SMG6-220ENST00000576218 ZNF843Q8N446 348 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 FKBP10Q96AY3 582 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 FBXL8Q96CD0 374 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 GPR22Q99680 433 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 ZNF304Q9HCX3 659 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 ZNF71Q9NQZ8 489 aaPredicted RBP14.57□□□□□ -0.08
SMG6-220ENST00000576218 ZDHHC18Q9NUE0 388 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 CDC14AQ9UNH5 594 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 OARD1Q9Y530 152 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 IKBKGQ9Y6K9 419 aa14.57□□□□□ -0.08
SMG6-220ENST00000576218 ATMQ13315 3056 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 C1QL1O75973 258 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 STATHP02808 62 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 CAPN1P07384 714 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 ITGAXP20702 1163 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 CCR8P51685 355 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 RAB10P61026 200 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 CHAF1BQ13112 559 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 ATP1A4Q13733 1029 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 CSHL1Q14406 222 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 EFTUD2Q15029 972 aaKnown RBP eCLIP14.56□□□□□ -0.08
SMG6-220ENST00000576218 TSNQ15631 228 aaKnown RBP14.56□□□□□ -0.08
SMG6-220ENST00000576218 HKDC1Q2TB90 917 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 LACTB2Q53H82 288 aaPredicted RBP14.56□□□□□ -0.08
SMG6-220ENST00000576218 PRMT9Q6P2P2 845 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 TBC1D1Q86TI0 1168 aaPredicted RBP14.56□□□□□ -0.08
SMG6-220ENST00000576218 SPATA6LQ8N4H0 392 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 OR2Y1Q8NGV0 311 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 ANKRD49Q8WVL7 239 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.56□□□□□ -0.08
SMG6-220ENST00000576218 ANKRD7Q92527 254 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 EXT2Q93063 718 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 PTERQ96BW5 349 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 ZNF285Q96NJ3 590 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 IP6K3Q96PC2 410 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 CYTH2Q99418 400 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 SGPP1Q9BX95 441 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 ING2Q9H160 280 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 WWOXQ9NZC7 414 aa14.56□□□□□ -0.08
SMG6-220ENST00000576218 DMGDHQ9UI17 866 aaKnown RBP14.56□□□□□ -0.08
SMG6-220ENST00000576218 NXT1Q9UKK6 140 aaKnown RBP14.56□□□□□ -0.08
SMG6-220ENST00000576218 RUVBL1Q9Y265 456 aaKnown RBP14.56□□□□□ -0.08
SMG6-220ENST00000576218 PCM1Q15154 2024 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 FAM155BO75949 473 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 DNAJB5O75953 348 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 ACSL3O95573 720 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 IGHEP01854 428 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 SERPIND1P05546 499 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 AVPR1BP47901 424 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 HNMTP50135 292 aa14.55□□□□□ -0.08
SMG6-220ENST00000576218 CCL11P51671 97 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms