RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 GABRR3A8MPY1 467 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 SPOPO43791 374 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 MSNP26038 577 aaKnown RBP15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 POU6F1Q14863 301 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 SLC18A3Q16572 532 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 MINDY4Q4G0A6 757 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 UNC5DQ6UXZ4 953 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 CPSF7Q8N684 471 aaKnown RBP15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 CSNK1A1LQ8N752 337 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 FAM57AQ8TBR7 257 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 ASZ1Q8WWH4 475 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 RND1Q92730 232 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 CYTH2Q99418 400 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 NPAS2Q99743 824 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 MDFIQ99750 246 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 FERMT1Q9BQL6 677 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 DPH7Q9BTV6 452 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 ACAT2Q9BWD1 397 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 REPIN1Q9BWE0 567 aaKnown RBP15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 RAB11FIP5Q9BXF6 653 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 HEMGNQ9BXL5 484 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 POLDIP3Q9BY77 421 aaKnown RBP15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 VN1R1Q9GZP7 353 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 ARNT2Q9HBZ2 717 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 LRFN1Q9P244 771 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 GNPTGQ9UJJ9 305 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 PLEKHA6Q9Y2H5 1048 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 KLK4Q9Y5K2 254 aa15.37■□□□□ 0.05
CTDNEP1-211ENST00000575783 IQCF5A8MTL0 148 aa15.36■□□□□ 0.05
CTDNEP1-211ENST00000575783 NEURL1O76050 574 aa15.36■□□□□ 0.05
CTDNEP1-211ENST00000575783 COMTP21964 271 aa15.36■□□□□ 0.05
CTDNEP1-211ENST00000575783 DNASE1P24855 282 aa15.36■□□□□ 0.05
CTDNEP1-211ENST00000575783 SLC1A1P43005 524 aa15.36■□□□□ 0.05
CTDNEP1-211ENST00000575783 EMP3P54852 163 aa15.36■□□□□ 0.05
CTDNEP1-211ENST00000575783 ADAM8P78325 824 aa15.36■□□□□ 0.05
CTDNEP1-211ENST00000575783 CCSMST1Q4G0I0 132 aa15.36■□□□□ 0.05
CTDNEP1-211ENST00000575783 RAB42Q8N4Z0 105 aa15.36■□□□□ 0.05
CTDNEP1-211ENST00000575783 OR2A1Q8NGT9 310 aa15.36■□□□□ 0.05
CTDNEP1-211ENST00000575783 STYXQ8WUJ0 223 aa15.36■□□□□ 0.05
CTDNEP1-211ENST00000575783 LRRC45Q96CN5 670 aa15.36■□□□□ 0.05
CTDNEP1-211ENST00000575783 PIH1D1Q9NWS0 290 aaKnown RBP15.36■□□□□ 0.05
CTDNEP1-211ENST00000575783 FEZ2Q9UHY8 353 aaPredicted RBP15.36■□□□□ 0.05
CTDNEP1-211ENST00000575783 TTC7AQ9ULT0 858 aaPredicted RBP15.36■□□□□ 0.05
CTDNEP1-211ENST00000575783 hCG_1818297A0A087WSY0 165 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 OR2A25A4D2G3 310 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 OR2W5A6NFC9 320 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 USP27XA6NNY8 438 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 F8W8V4 182 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 FOXS1O43638 330 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 CDC40O60508 579 aaKnown RBP eCLIP15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 VPS26AO75436 327 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 GPC4O75487 556 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 APOA4P06727 396 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 DGKQP52824 942 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 PMPCAQ10713 525 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 CCDC181Q5TID7 509 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 BIVMQ86UB2 503 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 CLYBLQ8N0X4 340 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 LKAAEAR1Q8TD35 194 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 SKA2Q8WVK7 121 aaPredicted RBP15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 RAD51AP1Q96B01 352 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 DRC3Q9H069 523 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 SYNPO2LQ9H987 977 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 SLC24A3Q9HC58 644 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 C19orf25Q9UFG5 118 aaPredicted RBP15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 CPAMD8Q8IZJ3 1885 aa15.35■□□□□ 0.05
CTDNEP1-211ENST00000575783 JMJD1CQ15652 2540 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 A0A0U1RQJ8 604 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 FAM237BA0A1B0GVD1 139 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 CCDC162PA2VCL2 907 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 SOWAHDA6NJG2 315 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 PROM1O43490 865 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 CTAG2O75638 210 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 SLC25A12O75746 678 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 STK10O94804 968 aaKnown RBP15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 CMPK1P30085 196 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 RFC3P40938 356 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 BDKRB1P46663 353 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 ZNF468Q5VIY5 522 aaPredicted RBP15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 SHISA5Q8N114 240 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 RPRMLQ8N4K4 120 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 SLC5A8Q8N695 610 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 GSDMBQ8TAX9 411 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 NANOS1Q8WY41 292 aaKnown RBP15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 PWWP2AQ96N64 755 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 TTC1Q99614 292 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 OLFM1Q99784 485 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 ANP32EQ9BTT0 268 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 TSSK1BQ9BXA7 367 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 CDCP1Q9H5V8 836 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 ZNF358Q9NW07 568 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 NFS1Q9Y697 457 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 AKAP6Q13023 2319 aa15.34■□□□□ 0.05
CTDNEP1-211ENST00000575783 A0A1W2PPV9 198 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 MACROD2A1Z1Q3 448 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 TFECO14948 347 aaPredicted RBP15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 NME2P1O60361 137 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 NME2P22392 152 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 FOXN2P32314 431 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 MEOX1P50221 254 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms