RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 TMEM150CB9EJG8 249 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 E7EQ34 232 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 E2F3O00716 465 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 TYROBPO43914 113 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 DLX3O60479 287 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 CTSVO60911 334 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 KATNA1O75449 491 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 EPB42P16452 691 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 HERVK_113P63132 956 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 CSNK1G2P78368 415 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 RELAQ04206 551 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 CATSPEREQ5SY80 951 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 IGF2-ASQ6U949 168 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 NXPE4Q6UWF7 544 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 MCATQ8IVS2 390 aaKnown RBP13.41□□□□□ -0.26
RPAIN-217ENST00000575711 TBC1D19Q8N5T2 526 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 ARMC2Q8NEN0 867 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 OR8K5Q8NH50 307 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 USP7Q93009 1102 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 ZNF501Q96CX3 271 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-217ENST00000575711 SLC46A1Q96NT5 459 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 FAM111AQ96PZ2 611 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 TEFMQ96QE5 360 aaKnown RBP13.41□□□□□ -0.26
RPAIN-217ENST00000575711 CTRCQ99895 268 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 ZFYVE21Q9BQ24 234 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 SELENOSQ9BQE4 189 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 ZPBPQ9BS86 351 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 ERVK-6Q9BXR3 956 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 ASPSCR1Q9BZE9 553 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 APMAPQ9HDC9 416 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 IRAK4Q9NWZ3 460 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 SERTAD3Q9UJW9 196 aa13.41□□□□□ -0.26
RPAIN-217ENST00000575711 LRRC14BA6NHZ5 514 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 G3V2L1 256 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 HAT1O14929 419 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 NRP2O60462 931 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 SRPX2O60687 465 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-217ENST00000575711 H2AFYO75367 372 aaKnown RBP13.4□□□□□ -0.26
RPAIN-217ENST00000575711 DXOO77932 396 aaKnown RBP13.4□□□□□ -0.26
RPAIN-217ENST00000575711 RPS17P08708 135 aaKnown RBP13.4□□□□□ -0.26
RPAIN-217ENST00000575711 ATXN8OSP0DMR3 200 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 C1GALT1C1LP0DN25 315 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 FGF5P12034 268 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 CPA3P15088 417 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 CXCR2P25025 360 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 GABRA4P48169 554 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 PRKAA2P54646 552 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 ITGA1P56199 1179 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 MAGOHP61326 146 aaKnown RBP13.4□□□□□ -0.26
RPAIN-217ENST00000575711 RPS15AP62244 130 aaKnown RBP13.4□□□□□ -0.26
RPAIN-217ENST00000575711 IRF8Q02556 426 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 CYP4F3Q08477 520 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 GTF2H2Q13888 395 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.4□□□□□ -0.26
RPAIN-217ENST00000575711 AGBL2Q5U5Z8 902 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 ATG9BQ674R7 924 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 GTF2H2CQ6P1K8 395 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 FBXO42Q6P3S6 717 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 SLCO4C1Q6ZQN7 724 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 GOLGA7Q7Z5G4 137 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 GPR135Q8IZ08 494 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 OR4K1Q8NGD4 311 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 PPP4R1Q8TF05 950 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 RERGQ96A58 199 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-217ENST00000575711 FCRL4Q96PJ5 515 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 AIF1LQ9BQI0 150 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 C1QTNF3Q9BXJ4 246 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 B3GNT4Q9C0J1 378 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 EHD1Q9H4M9 534 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 KCNK9Q9NPC2 374 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 THSD1Q9NS62 852 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 SLC17A7Q9P2U7 560 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 COPG2Q9UBF2 871 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 PILRAQ9UKJ1 303 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 PCDHGA3Q9Y5H0 932 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 B3GALT1Q9Y5Z6 326 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 SPTBN4Q9H254 2564 aa13.4□□□□□ -0.26
RPAIN-217ENST00000575711 FEZF1A0PJY2 475 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 C9orf172C9J069 976 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 TM9SF1O15321 606 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 NVLO15381 856 aaKnown RBP13.39□□□□□ -0.27
RPAIN-217ENST00000575711 PRPF4O43172 522 aaKnown RBP eCLIP13.39□□□□□ -0.27
RPAIN-217ENST00000575711 HCRTR1O43613 425 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 BRINP1O60477 761 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 OR2B3O76000 313 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 SUPT7LO94864 414 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 EPORP19235 508 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 IMPDH1P20839 514 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 VARSP26640 1264 aaKnown RBP13.39□□□□□ -0.27
RPAIN-217ENST00000575711 REEP5Q00765 189 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 MEF2AQ02078 507 aaPredicted RBP13.39□□□□□ -0.27
RPAIN-217ENST00000575711 CHIT1Q13231 466 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 XKR6Q5GH73 641 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 PAGE2BQ5JRK9 111 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 TCTE1Q5JU00 501 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 ZNF678Q5SXM1 525 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 TMEM126BQ8IUX1 230 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 PLD3Q8IV08 490 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 KRT78Q8N1N4 520 aa13.39□□□□□ -0.27
RPAIN-217ENST00000575711 OR1L3Q8NH93 324 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms