RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 SYCE3A1L190 88 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 NPIPA5E9PKD4 350 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 E9PLN8 166 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 FAM227AF5H4B4 570 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 I3L1I5 382 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 ASNA1O43681 348 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 PHF2O75151 1096 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 TJP3O95049 919 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 C8orf89P0DMQ9 161 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 ERGP11308 486 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 HOXB4P17483 251 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 IGFBP2P18065 325 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 CMPK1P30085 196 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 PPARGP37231 505 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 CCNFP41002 786 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 MAGEA1P43355 309 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 ALDH6A1Q02252 535 aaKnown RBP9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 RELAQ04206 551 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 FAM53BQ14153 422 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 NAA25Q14CX7 972 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 TSTD2Q5T7W7 516 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 FCRLBQ6BAA4 426 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 SPINK14Q6IE38 97 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 AADACL2Q6P093 401 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 MEX3BQ6ZN04 569 aaKnown RBP9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 CPEB2Q7Z5Q1 589 aaKnown RBP9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 LINC00523Q86TU6 105 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 PAQR7Q86WK9 346 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 BEST3Q8N1M1 668 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 RAB42Q8N4Z0 105 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 CSNK1A1LQ8N752 337 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 OR52K1Q8NGK4 314 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 OR6P1Q8NGX9 317 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 AGAP11Q8TF27 550 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 FRMD6Q96NE9 622 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 NPAS2Q99743 824 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 VKORC1Q9BQB6 163 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 TMUB1Q9BVT8 246 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 HES7Q9BYE0 225 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 VN1R1Q9GZP7 353 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 DRC3Q9H069 523 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 P2RY12Q9H244 342 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 KLHL1Q9NR64 748 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 NPIPA1Q9UND3 350 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 TFR2Q9UP52 801 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 MRFAP1Q9Y605 127 aa9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 ANKHD1Q8IWZ3 2542 aaKnown RBP9.43□□□□□ -0.9
CALCOCO2-227ENST00000575560 IGHV3-20A0A0C4DH32 117 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 A0A0U1RQJ8 604 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 PRMT5O14744 637 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 KPNA5O15131 536 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 FANCGO15287 622 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 ZNHIT1O43257 154 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 VPS26AO75436 327 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 SEC24DO94855 1032 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 MATN4O95460 622 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 CYC1P08574 325 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 ANXA5P08758 320 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 ADRA1DP25100 572 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 EEF1DP29692 281 aaKnown RBP9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 BDKRB1P46663 353 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 GDF10P55107 478 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 SNRPNP63162 240 aaKnown RBP9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 MAT1AQ00266 395 aaKnown RBP9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 CDH17Q12864 832 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 TMED2Q15363 201 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 OR1C1Q15619 314 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 BTBD16Q32M84 506 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 P3H1Q32P28 736 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 FASTKD1Q53R41 847 aaKnown RBP9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 ZNF425Q6IV72 752 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 LANCL3Q6ZV70 420 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 FGD2Q7Z6J4 655 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 LDB1Q86U70 411 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 CRLF3Q8IUI8 442 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 VSTM4Q8IW00 320 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 SHISA5Q8N114 240 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 GSDMBQ8TAX9 411 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 MAGEC3Q8TD91 643 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 CA5BP1Q8WTZ4 195 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 METTL21AQ8WXB1 218 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 MRFAP1L1Q96HT8 127 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 UTP23Q9BRU9 249 aaKnown RBP9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 ACAT2Q9BWD1 397 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 TSPAN10Q9H1Z9 355 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 MRPS30Q9NP92 439 aaKnown RBP9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 ANKRD10Q9NXR5 420 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 SPATA7Q9P0W8 599 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 MARCH4Q9P2E8 410 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 TNFRSF10DQ9UBN6 386 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 RUVBL2Q9Y230 463 aaKnown RBP9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 R3HDM2Q9Y2K5 976 aaKnown RBP9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 ASB1Q9Y576 335 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 VPS13CQ709C8 3753 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 ABCA2Q9BZC7 2435 aa9.42□□□□□ -0.9
CALCOCO2-227ENST00000575560 GTF3C1Q12789 2109 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 FAM221AA4D161 298 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 SOWAHDA6NJG2 315 aa9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 ERI2A8K979 691 aaKnown RBP9.41□□□□□ -0.9
CALCOCO2-227ENST00000575560 TXNDC9O14530 226 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms