RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 NAB1Q13506 487 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 C1orf189Q5VU69 101 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 TLDC1Q6P9B6 456 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 LCTLQ6UWM7 567 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 C3orf62Q6ZUJ4 267 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 PRSS41Q7RTY9 318 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 PPP1R32Q7Z5V6 425 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 SYVN1Q86TM6 617 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 APLFQ8IW19 511 aaPredicted RBP8.28□□□□□ -1.08
SMG6-216ENST00000575176 MYO1HQ8N1T3 1032 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 PDPRQ8NCN5 879 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 ZNF740Q8NDX6 193 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 ABHD11Q8NFV4 315 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 ZNF592Q92610 1267 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 MR1Q95460 341 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 FKBP10Q96AY3 582 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 CCDC138Q96M89 665 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 GPR78Q96P69 363 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 ATOH8Q96SQ7 321 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 DPH2Q9BQC3 489 aaPredicted RBP8.28□□□□□ -1.08
SMG6-216ENST00000575176 SELENOSQ9BQE4 189 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 DHRS4Q9BTZ2 278 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 GPR87Q9BY21 358 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 FAM129AQ9BZQ8 928 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 UNKQ9C0B0 810 aaKnown RBP8.28□□□□□ -1.08
SMG6-216ENST00000575176 ATG10Q9H0Y0 220 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 MLXIPLQ9NP71 852 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 MRPS30Q9NP92 439 aaKnown RBP8.28□□□□□ -1.08
SMG6-216ENST00000575176 CCDC177Q9NQR7 707 aaPredicted RBP8.28□□□□□ -1.08
SMG6-216ENST00000575176 IGSF5Q9NSI5 407 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 NSMCE4AQ9NXX6 385 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 COPG2Q9UBF2 871 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 SRPK3Q9UPE1 567 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 OARD1Q9Y530 152 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 PTPN13Q12923 2485 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 NBASA2RRP1 2371 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 KCNE1BA0A087WTH5 132 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 A0A1W2PQ72 361 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 LCMT2O60294 686 aaKnown RBP8.27□□□□□ -1.09
SMG6-216ENST00000575176 DNAJB5O75953 348 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 SYF2O95926 243 aaKnown RBP8.27□□□□□ -1.09
SMG6-216ENST00000575176 FAM153BP0C7A2 387 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 CTAGE8P0CG41 777 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 CDH1P12830 882 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 CD22P20273 847 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 CMPK1P30085 196 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 STX2P32856 288 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 RPA3P35244 121 aaPredicted RBP8.27□□□□□ -1.09
SMG6-216ENST00000575176 GGT5P36269 586 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 RGS4P49798 205 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 EMP3P54852 163 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 ABATP80404 500 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 REEP5Q00765 189 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 IRF9Q00978 393 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 NAE1Q13564 534 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 BMPR2Q13873 1038 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 ERV3-1Q14264 604 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 SLC9A5Q14940 896 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 TGFBIQ15582 683 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 NKG7Q16617 165 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 FAM153CQ494X1 144 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 NKAIN1Q4KMZ8 207 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 GLE1Q53GS7 698 aaKnown RBP8.27□□□□□ -1.09
SMG6-216ENST00000575176 WASHC2DQ5SRD0 308 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 BORAQ6PGQ7 559 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 MRGPREQ86SM8 312 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 CCDC25Q86WR0 208 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 PDSS2Q86YH6 399 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 CTAGE4Q8IX94 777 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 GSPT2Q8IYD1 628 aaKnown RBP8.27□□□□□ -1.09
SMG6-216ENST00000575176 SPATA6LQ8N4H0 392 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 AFAP1L2Q8N4X5 818 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 AMER2Q8N7J2 671 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 ANKRD53Q8N9V6 530 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 OR2Y1Q8NGV0 311 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 MZB1Q8WU39 189 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 NEIL2Q969S2 332 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 KIAA1143Q96AT1 154 aaPredicted RBP8.27□□□□□ -1.09
SMG6-216ENST00000575176 RHBDF1Q96CC6 855 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 CLIP3Q96DZ5 547 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 MED8Q96G25 268 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 FMO2Q99518 471 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 EFHD1Q9BUP0 239 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 CUTCQ9NTM9 273 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 GEMIN8Q9NWZ8 242 aaKnown RBP8.27□□□□□ -1.09
SMG6-216ENST00000575176 SERTAD3Q9UJW9 196 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 KCND3Q9UK17 655 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 AP1M2Q9Y6Q5 423 aa8.27□□□□□ -1.09
SMG6-216ENST00000575176 H7BY64 318 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 MASP2O00187 686 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 SOCS6O14544 535 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 SRPX2O60687 465 aaPredicted RBP8.26□□□□□ -1.09
SMG6-216ENST00000575176 STATHP02808 62 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 HBQ1P09105 142 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 SBK3P0C264 359 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 NR1D1P20393 614 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 OR1D4P47884 311 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 RAB10P61026 200 aa8.26□□□□□ -1.09
SMG6-216ENST00000575176 MEF2AQ02078 507 aaPredicted RBP8.26□□□□□ -1.09
SMG6-216ENST00000575176 CHAF1BQ13112 559 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms