RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 WRAP53Q9BUR4 548 aaKnown RBP4.72□□□□□ -1.65
PRPF8-211ENST00000574728 DUSP26Q9BV47 211 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 CALN1Q9BXU9 219 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 BRD8Q9H0E9 1235 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 TCEAL2Q9H3H9 227 aaPredicted RBP4.72□□□□□ -1.65
PRPF8-211ENST00000574728 DUSP22Q9NRW4 184 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 DONSONQ9NYP3 566 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 SLC17A6Q9P2U8 582 aa4.72□□□□□ -1.65
PRPF8-211ENST00000574728 GOLGA4Q13439 2230 aaKnown RBP4.72□□□□□ -1.65
PRPF8-211ENST00000574728 ACACAQ13085 2346 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 ASXL3Q9C0F0 2248 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 OR2W5A6NFC9 320 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 NPIPB15A6NHN6 443 aaPredicted RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 H0YIZ8 118 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 AP4M1O00189 453 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 CES2O00748 559 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 PIP5K1BO14986 540 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 CASC3O15234 703 aaKnown RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 ZSCAN9O15535 394 aaPredicted RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 TPD52L2O43399 206 aaKnown RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 SOCS5O75159 536 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 GCATO75600 419 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 RECQL5O94762 991 aaPredicted RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 HEXIM1O94992 359 aaKnown RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 CER1O95813 267 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 JCHAINP01591 159 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 ELFN1P0C7U0 828 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 THEGLP0DJG4 465 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 CCNB1P14635 433 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 DESP17661 470 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 HNRNPA2B1P22626 353 aaKnown RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 PTPN3P26045 913 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 SERPINA4P29622 427 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 SERPINB6P35237 376 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 CYLC1P35663 651 aaPredicted RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 HNF1BP35680 557 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 TRIM23P36406 574 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 HSPA9P38646 679 aaKnown RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 MSLNQ13421 630 aaPredicted RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 ATP1A4Q13733 1029 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 IRF4Q15306 451 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 PDCD2Q16342 344 aaPredicted RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 GRAMD1BQ3KR37 738 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 AARS2Q5JTZ9 985 aaKnown RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 TMTC4Q5T4D3 741 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 MARC1Q5VT66 337 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 DENND2CQ68D51 928 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 KDELC1Q6UW63 502 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 Q6ZSR6 202 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 HSD11B1LQ7Z5J1 315 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 TSPAN33Q86UF1 283 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 ZSCAN30Q86W11 494 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 ZNF354CQ86Y25 554 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 RASGRP3Q8IV61 690 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 MAP7D3Q8IWC1 876 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 CCDC13Q8IYE1 715 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 RYBPQ8N488 228 aaPredicted RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 SUN3Q8TAQ9 357 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 SCRN2Q96FV2 425 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 IMP4Q96G21 291 aaKnown RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 OXNAD1Q96HP4 312 aaPredicted RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 HES6Q96HZ4 224 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 VPS50Q96JG6 964 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 QKIQ96PU8 341 aaKnown RBP eCLIP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 PRR25Q96S07 402 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 LYSMD1Q96S90 227 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 SEMA3CQ99985 751 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 CINPQ9BW66 212 aaPredicted RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 FSD1LQ9BXM9 530 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 TDRD1Q9BXT4 1180 aaKnown RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 CLPBQ9H078 707 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 ATP13A3Q9H7F0 1226 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 C10orf88Q9H8K7 445 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 USP29Q9HBJ7 922 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 NT5MQ9NPB1 228 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 DYRK4Q9NR20 520 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 GDF3Q9NR23 364 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 RBM22Q9NW64 420 aaKnown RBP eCLIP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 AMACRQ9UHK6 382 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 TLK1Q9UKI8 766 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 R3HDM2Q9Y2K5 976 aaKnown RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 PCYT1BQ9Y5K3 369 aaPredicted RBP4.71□□□□□ -1.66
PRPF8-211ENST00000574728 ENTPD2Q9Y5L3 495 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 RAI2Q9Y5P3 530 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 DMRT1Q9Y5R6 373 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 TRPM6Q9BX84 2022 aa4.71□□□□□ -1.66
PRPF8-211ENST00000574728 COL5A1P20908 1838 aaPredicted RBP4.7□□□□□ -1.66
PRPF8-211ENST00000574728 A0A0J9YYE9 177 aa4.7□□□□□ -1.66
PRPF8-211ENST00000574728 LOC285095A0A1B0GVY8 99 aa4.7□□□□□ -1.66
PRPF8-211ENST00000574728 TMEM202A6NGA9 273 aa4.7□□□□□ -1.66
PRPF8-211ENST00000574728 A8MVJ9 347 aa4.7□□□□□ -1.66
PRPF8-211ENST00000574728 APOC4-APOC2K7ER74 178 aa4.7□□□□□ -1.66
PRPF8-211ENST00000574728 IFRD1O00458 451 aaPredicted RBP4.7□□□□□ -1.66
PRPF8-211ENST00000574728 MGST3O14880 152 aa4.7□□□□□ -1.66
PRPF8-211ENST00000574728 FLRT2O43155 660 aa4.7□□□□□ -1.66
PRPF8-211ENST00000574728 SPOPO43791 374 aa4.7□□□□□ -1.66
PRPF8-211ENST00000574728 DFNA5O60443 496 aa4.7□□□□□ -1.66
PRPF8-211ENST00000574728 CST8O60676 142 aa4.7□□□□□ -1.66
PRPF8-211ENST00000574728 SDC3O75056 442 aa4.7□□□□□ -1.66
PRPF8-211ENST00000574728 TM7SF2O76062 418 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms