RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 TRIM29Q14134 588 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 TMEM132DQ14C87 1099 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 PTPN14Q15678 1187 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 CES4AQ5XG92 561 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 NOTUMQ6P988 496 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 PRICKLE1Q96MT3 831 aaPredicted RBP3.98□□□□□ -1.77
CDC27-216ENST00000574304 DNAJC4Q9NNZ3 241 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 ANKEF1Q9NU02 776 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.98□□□□□ -1.77
CDC27-216ENST00000574304 BCCIPQ9P287 314 aaKnown RBP eCLIP3.98□□□□□ -1.77
CDC27-216ENST00000574304 WDR35Q9P2L0 1181 aa3.98□□□□□ -1.77
CDC27-216ENST00000574304 IGSF1Q8N6C5 1336 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 TRAV24A0A0B4J272 114 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 EPM2AB3EWF7 344 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 C2CD4DB7Z1M9 353 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 GSRP00390 522 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 ACHEP22303 614 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 RBMS1P29558 406 aaKnown RBP3.97□□□□□ -1.77
CDC27-216ENST00000574304 SOX3P41225 446 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 RASGEF1BQ0VAM2 473 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 SGCGQ13326 291 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 NONOQ15233 471 aaKnown RBP eCLIP3.97□□□□□ -1.77
CDC27-216ENST00000574304 TAB1Q15750 504 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 ZNF343Q6P1L6 599 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 C16orf54Q6UWD8 224 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 FRRS1Q6ZNA5 592 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 TLK2Q86UE8 772 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 SPEM1Q8N4L4 309 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 FAM89BQ8N5H3 189 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 TDRD5Q8NAT2 981 aaKnown RBP3.97□□□□□ -1.77
CDC27-216ENST00000574304 Q8NBF4 154 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 PIK3R3Q92569 461 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 SPSB1Q96BD6 273 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 CFAP57Q96MR6 1250 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 RPS10P5Q9NQ39 176 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 NDE1Q9NXR1 346 aa3.97□□□□□ -1.77
CDC27-216ENST00000574304 IGHV3OR16-10A0A075B7F0 116 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 PI4K2BG5E9Z4 385 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 DIAPH2O60879 1101 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 ACADSP16219 412 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 ELAVL4P26378 380 aaKnown RBP3.96□□□□□ -1.78
CDC27-216ENST00000574304 TLX1P31314 330 aaPredicted RBP3.96□□□□□ -1.78
CDC27-216ENST00000574304 OR3A2P47893 321 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 UBASH3AP57075 661 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 LY6DQ14210 128 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 OPCMLQ14982 345 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 CST9LP1Q5W188 147 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 CTR9Q6PD62 1173 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 GPRIN3Q6ZVF9 776 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 FCRLAQ7L513 359 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 P2RY8Q86VZ1 359 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 MFN1Q8IWA4 741 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 ANKRD13CQ8N6S4 541 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 PI4KAP1Q8N8J0 262 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 AQP11Q8NBQ7 271 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 OR5T2Q8NGG2 359 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 METTL21AQ8WXB1 218 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 C2orf48Q96LS8 159 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 AGAP4Q96P64 663 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 TDRD1Q9BXT4 1180 aaKnown RBP3.96□□□□□ -1.78
CDC27-216ENST00000574304 HOXD1Q9GZZ0 328 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 MUTYHQ9UIF7 546 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 SELENOKQ9Y6D0 94 aa3.96□□□□□ -1.78
CDC27-216ENST00000574304 TRBV4-1A0A0J9YWV2 114 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 CCL24O00175 119 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 P4HA2O15460 535 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 CEACAM4O75871 244 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 BAG3O95817 575 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 GATA2P23769 480 aaPredicted RBP3.95□□□□□ -1.78
CDC27-216ENST00000574304 ALDH1B1P30837 517 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 IRX4P78413 519 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 ILF2Q12905 390 aaKnown RBP3.95□□□□□ -1.78
CDC27-216ENST00000574304 TOMM20Q15388 145 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 TCTEX1D4Q5JR98 221 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 SPINK14Q6IE38 97 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 KRT80Q6KB66 452 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 CHMP1BQ7LBR1 199 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 ZER1Q7Z7L7 766 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 TSACCQ96A04 125 aaPredicted RBP3.95□□□□□ -1.78
CDC27-216ENST00000574304 FAM218AQ96MZ4 157 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 ZNF558Q96NG5 402 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 CDCA3Q99618 268 aaPredicted RBP3.95□□□□□ -1.78
CDC27-216ENST00000574304 OVOL2Q9BRP0 275 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 B3GAT2Q9NPZ5 323 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.95□□□□□ -1.78
CDC27-216ENST00000574304 PRDM4Q9UKN5 801 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 ELF5Q9UKW6 265 aaPredicted RBP3.95□□□□□ -1.78
CDC27-216ENST00000574304 PA2G4Q9UQ80 394 aaKnown RBP3.95□□□□□ -1.78
CDC27-216ENST00000574304 WIPI2Q9Y4P8 454 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 CSAG2Q9Y5P2 127 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 PCNX3Q9H6A9 2034 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 MYH15Q9Y2K3 1946 aa3.95□□□□□ -1.78
CDC27-216ENST00000574304 LOC105371242A0A075B767 164 aa3.94□□□□□ -1.78
CDC27-216ENST00000574304 URADA6NGE7 173 aa3.94□□□□□ -1.78
CDC27-216ENST00000574304 UBE2CO00762 179 aa3.94□□□□□ -1.78
CDC27-216ENST00000574304 FYNP06241 537 aa3.94□□□□□ -1.78
CDC27-216ENST00000574304 LDHCP07864 332 aa3.94□□□□□ -1.78
CDC27-216ENST00000574304 CETN2P41208 172 aa3.94□□□□□ -1.78
CDC27-216ENST00000574304 PPP5CP53041 499 aa3.94□□□□□ -1.78
CDC27-216ENST00000574304 DLK1P80370 383 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms