RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 RHBDF1Q96CC6 855 aa12.99□□□□□ -0.33
RPAIN-213ENST00000573577 DPH7Q9BTV6 452 aa12.99□□□□□ -0.33
RPAIN-213ENST00000573577 RRAGDQ9NQL2 400 aaPredicted RBP12.99□□□□□ -0.33
RPAIN-213ENST00000573577 PCMTD2Q9NV79 361 aa12.99□□□□□ -0.33
RPAIN-213ENST00000573577 WWOXQ9NZC7 414 aa12.99□□□□□ -0.33
RPAIN-213ENST00000573577 SNX7Q9UNH6 387 aa12.99□□□□□ -0.33
RPAIN-213ENST00000573577 PLCL2Q9UPR0 1127 aa12.99□□□□□ -0.33
RPAIN-213ENST00000573577 ERVH48-1M5A8F1 160 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 CPNE3O75131 537 aaKnown RBP12.98□□□□□ -0.33
RPAIN-213ENST00000573577 RFPL1O75677 317 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 CCNYL3P0C7X3 344 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 EZRP15311 586 aaKnown RBP12.98□□□□□ -0.33
RPAIN-213ENST00000573577 GLRBP48167 497 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 ITGA1P56199 1179 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 PTCHD3Q3KNS1 767 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 FCRL6Q6DN72 434 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 ADCK2Q7Z695 626 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 DNAJC22Q8N4W6 341 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 OR1L3Q8NH93 324 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 EPS8L3Q8TE67 593 aaKnown RBP12.98□□□□□ -0.33
RPAIN-213ENST00000573577 EXT2Q93063 718 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 PYCR2Q96C36 320 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 SLC45A3Q96JT2 553 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 SCYL1Q96KG9 808 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 ATOH8Q96SQ7 321 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 PLCD4Q9BRC7 762 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 EFHD1Q9BUP0 239 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 FAM60AQ9NP50 221 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 TMEM184CQ9NVA4 438 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 IRAK4Q9NWZ3 460 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 TMCO1Q9UM00 188 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 PLAAQ9Y263 795 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 KLHL20Q9Y2M5 609 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 DYRK1BQ9Y463 629 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 KCNE2Q9Y6J6 123 aa12.98□□□□□ -0.33
RPAIN-213ENST00000573577 TLDC2A0PJX2 215 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 OR2A25A4D2G3 310 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 E7EQ34 232 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 ATXN7O15265 892 aaPredicted RBP12.97□□□□□ -0.33
RPAIN-213ENST00000573577 SRPX2O60687 465 aaPredicted RBP12.97□□□□□ -0.33
RPAIN-213ENST00000573577 STK16O75716 305 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 WDR47O94967 919 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 NTRK1P04629 796 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 GSTA1P08263 222 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 GFAPP14136 432 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 NPPBP16860 134 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 GRK3P35626 688 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 GGT5P36269 586 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 GMPRP36959 345 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 RELAQ04206 551 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 SOWAHCQ53LP3 525 aaPredicted RBP12.97□□□□□ -0.33
RPAIN-213ENST00000573577 TCTE1Q5JU00 501 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 CROCCP2Q86T23 111 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 THOC6Q86W42 341 aaKnown RBP12.97□□□□□ -0.33
RPAIN-213ENST00000573577 MCATQ8IVS2 390 aaKnown RBP12.97□□□□□ -0.33
RPAIN-213ENST00000573577 PLD6Q8N2A8 252 aaKnown RBP12.97□□□□□ -0.33
RPAIN-213ENST00000573577 TBC1D19Q8N5T2 526 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 OR2W6PQ8NHA6 318 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 TTC9Q92623 222 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 GPR78Q96P69 363 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 BBC3Q96PG8 261 aaPredicted RBP12.97□□□□□ -0.33
RPAIN-213ENST00000573577 ZFYVE21Q9BQ24 234 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 MRPL57Q9BQC6 102 aaKnown RBP12.97□□□□□ -0.33
RPAIN-213ENST00000573577 CAPS2Q9BXY5 557 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 SLC7A5P2Q9GIP4 190 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 SLC6A20Q9NP91 592 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 LHX9Q9NQ69 397 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 EURLQ9NYK6 297 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 IL17BQ9UHF5 180 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 PTBP2Q9UKA9 531 aaKnown RBP12.97□□□□□ -0.33
RPAIN-213ENST00000573577 CROTQ9UKG9 612 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 PADI1Q9ULC6 663 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 SLC22A14Q9Y267 594 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 PCDHB3Q9Y5E6 796 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 AP1M2Q9Y6Q5 423 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 ANKRD12Q6UB98 2062 aa12.97□□□□□ -0.33
RPAIN-213ENST00000573577 ZNF891A8MT65 544 aaPredicted RBP12.96□□□□□ -0.33
RPAIN-213ENST00000573577 H7BY64 318 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 UBXN8O00124 270 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 MAP2K7O14733 419 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 TERTO14746 1132 aaKnown RBP12.96□□□□□ -0.33
RPAIN-213ENST00000573577 SMIM24O75264 130 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 OR2B3O76000 313 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 ITGB2P05107 769 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 HBQ1P09105 142 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 DLSTP36957 453 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 SLC6A12P48065 614 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 GABRA4P48169 554 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 KCNC1P48547 511 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 CCT5P48643 541 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 CCR8P51685 355 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 CYP4F2P78329 520 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 DEFB110Q30KQ9 67 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 TECRLQ5HYJ1 363 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 PRAMEF17Q5VTA0 474 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 ZNF425Q6IV72 752 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 TLDC1Q6P9B6 456 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 PCSK4Q6UW60 755 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 RNF44Q7L0R7 432 aa12.96□□□□□ -0.33
RPAIN-213ENST00000573577 LRRC70Q7Z2Q7 622 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms