RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 LRRC56Q8IYG6 542 aaPredicted RBP16.5■□□□□ 0.23
LITAF-211ENST00000572255 RERGQ96A58 199 aaPredicted RBP16.5■□□□□ 0.23
LITAF-211ENST00000572255 MVB12AQ96EY5 273 aa16.5■□□□□ 0.23
LITAF-211ENST00000572255 AGAP4Q96P64 663 aa16.5■□□□□ 0.23
LITAF-211ENST00000572255 OR2A5Q96R48 311 aa16.5■□□□□ 0.23
LITAF-211ENST00000572255 WDR77Q9BQA1 342 aaPredicted RBP16.5■□□□□ 0.23
LITAF-211ENST00000572255 AARSD1Q9BTE6 412 aaKnown RBP16.5■□□□□ 0.23
LITAF-211ENST00000572255 LHPPQ9H008 270 aa16.5■□□□□ 0.23
LITAF-211ENST00000572255 IARS2Q9NSE4 1012 aaKnown RBP16.5■□□□□ 0.23
LITAF-211ENST00000572255 PCYOX1Q9UHG3 505 aa16.5■□□□□ 0.23
LITAF-211ENST00000572255 C3orf18Q9UK00 162 aa16.5■□□□□ 0.23
LITAF-211ENST00000572255 SNX12Q9UMY4 172 aa16.5■□□□□ 0.23
LITAF-211ENST00000572255 PCDHGA10Q9Y5H3 936 aa16.5■□□□□ 0.23
LITAF-211ENST00000572255 CSAG2Q9Y5P2 127 aa16.5■□□□□ 0.23
LITAF-211ENST00000572255 EIF3FO00303 357 aaPredicted RBP16.49■□□□□ 0.23
LITAF-211ENST00000572255 CES2O00748 559 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 MAP2K7O14733 419 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 HAT1O14929 419 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 PRPF4O43172 522 aaKnown RBP eCLIP16.49■□□□□ 0.23
LITAF-211ENST00000572255 ACPPP15309 386 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 PGAM1P18669 254 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 IMPA1P29218 277 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 RELAQ04206 551 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 Q0VFX4 171 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 PTK6Q13882 451 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 CRYMQ14894 314 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 NR6A1Q15406 480 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 HIF1AQ16665 826 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 CRB2Q5IJ48 1285 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 THEMIS2Q5TEJ8 643 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 IGFL2Q6UWQ7 119 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 UBE2R2Q712K3 238 aaPredicted RBP16.49■□□□□ 0.23
LITAF-211ENST00000572255 ADCK2Q7Z695 626 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 CUEDC1Q9NWM3 386 aaPredicted RBP16.49■□□□□ 0.23
LITAF-211ENST00000572255 TRPC4Q9UBN4 977 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 ASIC3Q9UHC3 531 aa16.49■□□□□ 0.23
LITAF-211ENST00000572255 TRMT6Q9UJA5 497 aaKnown RBP16.49■□□□□ 0.23
LITAF-211ENST00000572255 COPG1Q9Y678 874 aaKnown RBP16.49■□□□□ 0.23
LITAF-211ENST00000572255 FFAR3O14843 346 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 GPR42O15529 346 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 P2RX6O15547 441 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 ZSCAN12O43309 604 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 HPP00738 406 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 GARNL3Q5VVW2 1013 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 ATG9BQ674R7 924 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 LAPTM4BQ86VI4 370 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 PLD3Q8IV08 490 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 ARHGEF39Q8N4T4 335 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 C2CD4AQ8NCU7 369 aaPredicted RBP16.48■□□□□ 0.23
LITAF-211ENST00000572255 PPP4R1Q8TF05 950 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 SSC4DQ8WTU2 575 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 C8orf44Q96CB5 159 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 MMABQ96EY8 250 aaPredicted RBP16.48■□□□□ 0.23
LITAF-211ENST00000572255 THOC3Q96J01 351 aaKnown RBP16.48■□□□□ 0.23
LITAF-211ENST00000572255 NDNQ99608 321 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 EBNA1BP2Q99848 306 aaKnown RBP16.48■□□□□ 0.23
LITAF-211ENST00000572255 YIPF2Q9BWQ6 316 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 ZNF160Q9HCG1 818 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 NTNG1Q9Y2I2 539 aa16.48■□□□□ 0.23
LITAF-211ENST00000572255 IDSB3KWA1 339 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 H7BY64 318 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 TXNDC9O14530 226 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 DNALI1O14645 258 aaPredicted RBP16.47■□□□□ 0.23
LITAF-211ENST00000572255 BANF1O75531 89 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 CBX6O95503 412 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 ANXA5P08758 320 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 SLC26A3P40879 764 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 GLRBP48167 497 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 EMP2P54851 167 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 TIAL1Q01085 375 aaKnown RBP eCLIP16.47■□□□□ 0.23
LITAF-211ENST00000572255 DHX9Q08211 1270 aaKnown RBP16.47■□□□□ 0.23
LITAF-211ENST00000572255 LRRC8EQ6NSJ5 796 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 UGT3A1Q6NUS8 523 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 AMER3Q8N944 861 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 PRR7Q8TB68 274 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 EEF1AKMT1Q8WVE0 214 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 PRAP1Q96NZ9 151 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 DRC3Q9H069 523 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 DDX47Q9H0S4 455 aaKnown RBP16.47■□□□□ 0.23
LITAF-211ENST00000572255 EPS8L2Q9H6S3 715 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 CCDC177Q9NQR7 707 aaPredicted RBP16.47■□□□□ 0.23
LITAF-211ENST00000572255 C14orf105Q9NVL8 296 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 ADAMTS6Q9UKP5 1117 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 NOVA2Q9UNW9 492 aaKnown RBP16.47■□□□□ 0.23
LITAF-211ENST00000572255 UNC79Q9P2D8 2635 aa16.47■□□□□ 0.23
LITAF-211ENST00000572255 A0A0A6YYC8 382 aaPredicted RBP16.46■□□□□ 0.23
LITAF-211ENST00000572255 I3L1I5 382 aaPredicted RBP16.46■□□□□ 0.23
LITAF-211ENST00000572255 FOXS1O43638 330 aa16.46■□□□□ 0.23
LITAF-211ENST00000572255 TTC4O95801 387 aa16.46■□□□□ 0.23
LITAF-211ENST00000572255 RNF224P0DH78 156 aa16.46■□□□□ 0.23
LITAF-211ENST00000572255 RGS4P49798 205 aa16.46■□□□□ 0.23
LITAF-211ENST00000572255 TBPL1P62380 186 aa16.46■□□□□ 0.23
LITAF-211ENST00000572255 MSS51Q4VC12 460 aa16.46■□□□□ 0.23
LITAF-211ENST00000572255 SPANXN3Q5MJ09 141 aa16.46■□□□□ 0.23
LITAF-211ENST00000572255 ISLR2Q6UXK2 745 aa16.46■□□□□ 0.23
LITAF-211ENST00000572255 GABPB2Q8TAK5 448 aaPredicted RBP16.46■□□□□ 0.23
LITAF-211ENST00000572255 DNAJB14Q8TBM8 379 aa16.46■□□□□ 0.23
LITAF-211ENST00000572255 MCOLN3Q8TDD5 553 aa16.46■□□□□ 0.23
LITAF-211ENST00000572255 BARD1Q99728 777 aaKnown RBP16.46■□□□□ 0.23
LITAF-211ENST00000572255 MKKSQ9NPJ1 570 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms