RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 LMX1AQ8TE12 382 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 SLC37A2Q8TED4 501 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 SLC22A18Q96BI1 424 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 MTERF1Q99551 399 aaKnown RBP12.14□□□□□ -0.47
GGA2-213ENST00000568922 SLC25A23Q9BV35 468 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 NT5DC2Q9H857 520 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 ZIM2Q9NZV7 527 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 VPS29Q9UBQ0 182 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 ADGRE2Q9UHX3 823 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 FBXO4Q9UKT5 387 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 DOLKQ9UPQ8 538 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 COL6A3P12111 3177 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 TRIOO75962 3097 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 MAGEB17A8MXT2 336 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 SNRPB2P08579 225 aaKnown RBP12.14□□□□□ -0.47
GGA2-213ENST00000568922 CHRM5P08912 532 aaPredicted RBP12.14□□□□□ -0.47
GGA2-213ENST00000568922 ACPPP15309 386 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 HRH2P25021 359 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 MAPK1P28482 360 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 SERPINB1P30740 379 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 PIK3CBP42338 1070 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 REEP5Q00765 189 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 STX5Q13190 355 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 DDX39BQ13838 428 aaKnown RBP12.14□□□□□ -0.47
GGA2-213ENST00000568922 GPR18Q14330 331 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 KIAA0040Q15053 153 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 DNAL1Q4LDG9 190 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 CACHD1Q5VU97 1274 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 GK5Q6ZS86 529 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 FAM9CQ8IZT9 166 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 TMEM105Q8N8V8 129 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 RBM15BQ8NDT2 890 aaKnown RBP12.14□□□□□ -0.47
GGA2-213ENST00000568922 PATE1Q8WXA2 126 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 TWSG1Q9GZX9 223 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 ERVMER34-1Q9H9K5 563 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 MRPS30Q9NP92 439 aaKnown RBP12.14□□□□□ -0.47
GGA2-213ENST00000568922 CUEDC1Q9NWM3 386 aaPredicted RBP12.14□□□□□ -0.47
GGA2-213ENST00000568922 NMRK1Q9NWW6 199 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 SUSD2Q9UGT4 822 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 PPT2Q9UMR5 302 aa12.14□□□□□ -0.47
GGA2-213ENST00000568922 POLR3HQ9Y535 204 aaPredicted RBP12.14□□□□□ -0.47
GGA2-213ENST00000568922 ABCA7Q8IZY2 2146 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 ISM1B1AKI9 464 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 AQP9O43315 295 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 SLC22A3O75751 556 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 NQO1P15559 274 aaKnown RBP12.13□□□□□ -0.47
GGA2-213ENST00000568922 CMPK1P30085 196 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 PEBP1P30086 187 aaKnown RBP12.13□□□□□ -0.47
GGA2-213ENST00000568922 MEF2AQ02078 507 aaPredicted RBP12.13□□□□□ -0.47
GGA2-213ENST00000568922 CUL3Q13618 768 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 KIR2DS3Q14952 304 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 SF1Q15637 639 aaKnown RBP12.13□□□□□ -0.47
GGA2-213ENST00000568922 CYP20A1Q6UW02 462 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 FUNDC1Q8IVP5 155 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 ADGRF3Q8IZF5 1079 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 KIF2BQ8N4N8 673 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 OR2L3Q8NG85 312 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 OR9I1Q8NGQ6 314 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 TSPEARQ8WU66 669 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 JPH3Q8WXH2 748 aaPredicted RBP12.13□□□□□ -0.47
GGA2-213ENST00000568922 RAB3IPQ96QF0 476 aaPredicted RBP12.13□□□□□ -0.47
GGA2-213ENST00000568922 TBC1D10AQ9BXI6 508 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 SPNS1Q9H2V7 528 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 RHBGQ9H310 441 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 EFCAB1Q9HAE3 211 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 PRM3Q9NNZ6 103 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 DMRT3Q9NQL9 472 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 TMEM184CQ9NVA4 438 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 SPHK1Q9NYA1 384 aa12.13□□□□□ -0.47
GGA2-213ENST00000568922 TDRD6O60522 2096 aaKnown RBP12.13□□□□□ -0.47
GGA2-213ENST00000568922 TECTAO75443 2155 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 BBIP1A8MTZ0 92 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 B4DGG1 531 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 H7BY64 318 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 YY2O15391 372 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 G6PDP11413 515 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 PRPS2P11908 318 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 CD1EP15812 388 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 AMD1P17707 334 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 NME5P56597 212 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 RPS13P62277 151 aaKnown RBP12.12□□□□□ -0.47
GGA2-213ENST00000568922 KCNJ2P63252 427 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 YBX1P67809 324 aaKnown RBP12.12□□□□□ -0.47
GGA2-213ENST00000568922 CSNK1G2P78368 415 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 HHEXQ03014 270 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 RBBP5Q15291 538 aaKnown RBP12.12□□□□□ -0.47
GGA2-213ENST00000568922 PLK5Q496M5 336 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.12□□□□□ -0.47
GGA2-213ENST00000568922 RNF175Q8N4F7 328 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 ZNF548Q8NEK5 533 aaPredicted RBP12.12□□□□□ -0.47
GGA2-213ENST00000568922 APIPQ96GX9 242 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 FCRL1Q96LA6 429 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 PRAP1Q96NZ9 151 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 SERPINI1Q99574 410 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 NDE1Q9NXR1 346 aa12.12□□□□□ -0.47
GGA2-213ENST00000568922 A0A1B0GVT2 93 aa12.11□□□□□ -0.47
GGA2-213ENST00000568922 DYTNA2CJ06 578 aa12.11□□□□□ -0.47
GGA2-213ENST00000568922 ANKDD1BA6NHY2 528 aa12.11□□□□□ -0.47
GGA2-213ENST00000568922 LMO7DNF2Z398 122 aa12.11□□□□□ -0.47
GGA2-213ENST00000568922 BTN3A3O00478 584 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms