RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 ANKMY2Q8IV38 441 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 SPNS2Q8IVW8 549 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 LRRC56Q8IYG6 542 aaPredicted RBP6.6□□□□□ -1.35
SF3B3-209ENST00000567635 MYO1HQ8N1T3 1032 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 BBOF1Q8ND07 529 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 PPFIBP2Q8ND30 876 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 RERGQ96A58 199 aaPredicted RBP6.6□□□□□ -1.35
SF3B3-209ENST00000567635 VPS50Q96JG6 964 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 CABS1Q96KC9 395 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 PWWP2AQ96N64 755 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 KRT12Q99456 494 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 NDNQ99608 321 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 SMAD5Q99717 465 aaKnown RBP6.6□□□□□ -1.35
SF3B3-209ENST00000567635 TRIM51Q9BSJ1 452 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 NUDT9Q9BW91 350 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 TRIM54Q9BYV2 358 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 TRIM31Q9BZY9 425 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 PCBD2Q9H0N5 130 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 PLAC1Q9HBJ0 212 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 SEMA3GQ9NS98 782 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 TMEM184CQ9NVA4 438 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 C5AR2Q9P296 337 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 STOX2Q9P2F5 926 aaPredicted RBP6.6□□□□□ -1.35
SF3B3-209ENST00000567635 TAC3Q9UHF0 121 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 CDC23Q9UJX2 597 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 NXT1Q9UKK6 140 aaKnown RBP6.6□□□□□ -1.35
SF3B3-209ENST00000567635 CORO1CQ9ULV4 474 aaPredicted RBP6.6□□□□□ -1.35
SF3B3-209ENST00000567635 CHMP2BQ9UQN3 213 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 PDE10AQ9Y233 779 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 VWA7Q9Y334 891 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 MAU2Q9Y6X3 613 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 LRRK2Q5S007 2527 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 UBR5O95071 2799 aaPredicted RBP6.6□□□□□ -1.35
SF3B3-209ENST00000567635 POLEQ07864 2286 aa6.6□□□□□ -1.35
SF3B3-209ENST00000567635 ASH1LQ9NR48 2969 aaKnown RBP6.59□□□□□ -1.35
SF3B3-209ENST00000567635 KCNE1BA0A087WTH5 132 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 FAM187AA6NFU0 413 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 VSTM2BA6NLU5 285 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 H7BY64 318 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 NDC80O14777 642 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 HAT1O14929 419 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 TP73O15350 636 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 PRPF4O43172 522 aaKnown RBP eCLIP6.59□□□□□ -1.35
SF3B3-209ENST00000567635 IPO13O94829 963 aaKnown RBP6.59□□□□□ -1.35
SF3B3-209ENST00000567635 MED26O95402 600 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 ALPPP05187 535 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 HIST1H2AGP0C0S8 130 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-209ENST00000567635 ZGLP1P0C6A0 271 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 HIST1H2ADP20671 130 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 CCND1P24385 295 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 IMPA1P29218 277 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 CASQ1P31415 396 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 RPL21P46778 160 aaKnown RBP6.59□□□□□ -1.35
SF3B3-209ENST00000567635 MLLT10P55197 1068 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 SOX8P57073 446 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 FOXL2P58012 376 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 KLC1Q07866 573 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 MGAT5Q09328 741 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 PDIA2Q13087 525 aaKnown RBP6.59□□□□□ -1.35
SF3B3-209ENST00000567635 AIMP2Q13155 320 aaKnown RBP6.59□□□□□ -1.35
SF3B3-209ENST00000567635 CBLBQ13191 982 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 SP140Q13342 867 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 RAPSNQ13702 412 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 DSG2Q14126 1118 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 MYBPC3Q14896 1274 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 NADK2Q4G0N4 442 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 VWA5B1Q5TIE3 1220 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 HECTD2Q5U5R9 776 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 GARNL3Q5VVW2 1013 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 JMJD6Q6NYC1 403 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-209ENST00000567635 TRMT10BQ6PF06 316 aaKnown RBP6.59□□□□□ -1.35
SF3B3-209ENST00000567635 KIRREL2Q6UWL6 708 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 SHISA6Q6ZSJ9 500 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 COX15Q7KZN9 410 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 MAATS1Q7Z4T9 603 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 ADCK2Q7Z695 626 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 TMEM151BQ8IW70 566 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 GALNT16Q8N428 558 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 DTWD1Q8N5C7 304 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 METTL27Q8N6F8 245 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-209ENST00000567635 CSNK1A1LQ8N752 337 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 GPATCH11Q8N954 259 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 MIEF2Q96C03 454 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 MVB12AQ96EY5 273 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 LINGO1Q96FE5 620 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 HIST1H2AHQ96KK5 128 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 PRAP1Q96NZ9 151 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 OR2A5Q96R48 311 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 HIST1H2AJQ99878 128 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 H2AFJQ9BTM1 129 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 YIPF2Q9BWQ6 316 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 SOX17Q9H6I2 414 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-209ENST00000567635 CCDC177Q9NQR7 707 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-209ENST00000567635 CTSFQ9UBX1 484 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 ZNF282Q9UDV7 671 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-209ENST00000567635 FBXL4Q9UKA2 621 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 ADAMTS6Q9UKP5 1117 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 PLAAQ9Y263 795 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 SNX24Q9Y343 169 aa6.59□□□□□ -1.35
SF3B3-209ENST00000567635 SPTAN1Q13813 2472 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms