RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 FRMD3A2A2Y4 597 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 ANKUB1A6NFN9 424 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 CDRT15L2A8MXV6 281 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 ARPC2O15144 300 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 OR10H2O60403 315 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 MITFO75030 526 aaPredicted RBP1.58□□□□□ -2.16
SMG1-212ENST00000566328 BAIAP3O94812 1187 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 TMEM63AO94886 807 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 RARGP13631 454 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 MMP9P14780 707 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 AADACP22760 399 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 RGRP47804 291 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 ALDH3A2P51648 485 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 PRELPP51888 382 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 TRIM29Q14134 588 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 KIAA0141Q14154 515 aaPredicted RBP1.58□□□□□ -2.16
SMG1-212ENST00000566328 SYT14P1Q58G82 188 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 KIAA0930Q6ICG6 404 aaPredicted RBP1.58□□□□□ -2.16
SMG1-212ENST00000566328 NOL8Q76FK4 1167 aaKnown RBP1.58□□□□□ -2.16
SMG1-212ENST00000566328 LDB1Q86U70 411 aaPredicted RBP1.58□□□□□ -2.16
SMG1-212ENST00000566328 HSCBQ8IWL3 235 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 LGI2Q8N0V4 545 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 AVL9Q8NBF6 648 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 RFFLQ8WZ73 363 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 LRRC59Q96AG4 307 aaKnown RBP1.58□□□□□ -2.16
SMG1-212ENST00000566328 FAM20AQ96MK3 541 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 LRRCC1Q9C099 1032 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 SPATC1LQ9H0A9 340 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 MUC13Q9H3R2 512 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.58□□□□□ -2.16
SMG1-212ENST00000566328 PDP2Q9P2J9 529 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.58□□□□□ -2.16
SMG1-212ENST00000566328 CFDP1Q9UEE9 299 aaPredicted RBP1.58□□□□□ -2.16
SMG1-212ENST00000566328 KDM6BO15054 1643 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 KIAA0556O60303 1618 aa1.58□□□□□ -2.16
SMG1-212ENST00000566328 AKNAQ7Z591 1439 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 TRAPPC8Q9Y2L5 1435 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 UHRF1BP1LA0JNW5 1464 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 ARHGAP35Q9NRY4 1499 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 WDR7Q9Y4E6 1490 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 MAPKBP1O60336 1514 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 ARHGEF12Q9NZN5 1544 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 ABCA8O94911 1581 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 KRTAP4-16G5E9R7 235 aaPredicted RBP1.57□□□□□ -2.16
SMG1-212ENST00000566328 K7ENM7 598 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 SLC1A7O00341 560 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 IFRD1O00458 451 aaPredicted RBP1.57□□□□□ -2.16
SMG1-212ENST00000566328 PRDM1O75626 825 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 CREG1O75629 220 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 RNASEH2AO75792 299 aaKnown RBP1.57□□□□□ -2.16
SMG1-212ENST00000566328 RTN3O95197 1032 aaPredicted RBP1.57□□□□□ -2.16
SMG1-212ENST00000566328 BCL10O95999 233 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 RENP00797 406 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 RB1P06400 928 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 GJA1P17302 382 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 GABRB1P18505 474 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 PKLRP30613 574 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 SUOXP51687 545 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 RIDAP52758 137 aaKnown RBP1.57□□□□□ -2.16
SMG1-212ENST00000566328 NDST2P52849 883 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 UCNP55089 124 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 CDH8P55286 799 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 NDUFV3P56181 108 aaKnown RBP1.57□□□□□ -2.16
SMG1-212ENST00000566328 RIPK4P57078 832 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 SRPXP78539 464 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 TMF1P82094 1093 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 ACY1Q03154 408 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 CA9Q16790 459 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 UGT3A2Q3SY77 523 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 LINC00242Q5T6M2 205 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 C9orf66Q5T8R8 295 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 CLEC17AQ6ZS10 378 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 IQCHQ86VS3 1027 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 NDUFAF2Q8N183 169 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 MORC4Q8TE76 937 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 SSC4DQ8WTU2 575 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 THOC1Q96FV9 657 aaKnown RBP1.57□□□□□ -2.16
SMG1-212ENST00000566328 HRH4Q9H3N8 390 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 UBN1Q9NPG3 1134 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 DPP3Q9NY33 737 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 PRDM4Q9UKN5 801 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 ELF5Q9UKW6 265 aaPredicted RBP1.57□□□□□ -2.16
SMG1-212ENST00000566328 CORO1CQ9ULV4 474 aaPredicted RBP1.57□□□□□ -2.16
SMG1-212ENST00000566328 ZNF148Q9UQR1 794 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 CHKBQ9Y259 395 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 IGSF1Q8N6C5 1336 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 SIGLEC1Q9BZZ2 1709 aa1.57□□□□□ -2.16
SMG1-212ENST00000566328 MAGI3Q5TCQ9 1506 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 KIF21BO75037 1637 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 MAP3K4Q9Y6R4 1608 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 WI2-2373I1.2A0A1W2PRP0 233 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 LNP1A1A4G5 178 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 FPGTO14772 594 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 MT-ND1P03886 318 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 CLTBP09497 229 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 SMIM18P0DKX4 95 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 ACSL1P33121 698 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 MAT1AQ00266 395 aaKnown RBP1.56□□□□□ -2.16
SMG1-212ENST00000566328 CXCL9Q07325 125 aa1.56□□□□□ -2.16
SMG1-212ENST00000566328 UPP1Q16831 310 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms