RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 MAP3K3Q99759 626 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 EGFL8Q99944 293 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 C12orf65Q9H3J6 166 aaKnown RBP12.15□□□□□ -0.46
SF3B3-206ENST00000565990 CCDC177Q9NQR7 707 aaPredicted RBP12.15□□□□□ -0.46
SF3B3-206ENST00000565990 SLC22A14Q9Y267 594 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 TNPO3Q9Y5L0 923 aaKnown RBP12.15□□□□□ -0.46
SF3B3-206ENST00000565990 MDC1Q14676 2089 aaKnown RBP12.14□□□□□ -0.47
SF3B3-206ENST00000565990 SPTBN4Q9H254 2564 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 IGHV5-51A0A0C4DH38 117 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 GSAPA4D1B5 854 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 TLCD2A6NGC4 264 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 PEX11AO75192 247 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 SMIM24O75264 130 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 CPA3P15088 417 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 GNAZP19086 355 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 IMPDH1P20839 514 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 ATP5F1P24539 256 aaPredicted RBP12.14□□□□□ -0.47
SF3B3-206ENST00000565990 HRH2P25021 359 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 GRIA3P42263 894 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 GDF5P43026 501 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 DNAJB13P59910 316 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 TBPL1P62380 186 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 YBX1P67809 324 aaKnown RBP12.14□□□□□ -0.47
SF3B3-206ENST00000565990 E2F2Q14209 437 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 SF1Q15637 639 aaKnown RBP12.14□□□□□ -0.47
SF3B3-206ENST00000565990 KIAA1614Q5VZ46 1190 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 IRGCQ6NXR0 463 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 ZYG11AQ6WRX3 759 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 FAM92BQ6ZTR7 304 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 TMPRSS7Q7RTY8 843 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 KMT5CQ86Y97 462 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 SLC22A9Q8IVM8 553 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 FBXO39Q8N4B4 442 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 FAM13CQ8NE31 585 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 ABHD11Q8NFV4 315 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 ESAMQ96AP7 390 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 PYCR2Q96C36 320 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 PTCD3Q96EY7 689 aaKnown RBP12.14□□□□□ -0.47
SF3B3-206ENST00000565990 PPM1MQ96MI6 270 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 TMEM74Q96NL1 305 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 HAUS8Q9BT25 410 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 ZNF768Q9H5H4 540 aaKnown RBP12.14□□□□□ -0.47
SF3B3-206ENST00000565990 NPHS2Q9NP85 383 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 ENAMQ9NRM1 1142 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 OXSMQ9NWU1 459 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 GPRC5BQ9NZH0 403 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 SLC17A7Q9P2U7 560 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 STOML1Q9UBI4 398 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 STK38LQ9Y2H1 464 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 ASB1Q9Y576 335 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 KIF26BQ2KJY2 2108 aa12.14□□□□□ -0.47
SF3B3-206ENST00000565990 IGKV1-8A0A0C4DH67 115 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 A0A0J9YY10 115 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 A8MT66 165 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 E2F3O00716 465 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 HGSO14964 777 aaPredicted RBP12.13□□□□□ -0.47
SF3B3-206ENST00000565990 MSL3P1P0C860 447 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 GFAPP14136 432 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 NELFEP18615 380 aaKnown RBP12.13□□□□□ -0.47
SF3B3-206ENST00000565990 EPORP19235 508 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 MPSTP25325 297 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 PSMB5P28074 263 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 CASP2P42575 452 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 HSPA7P48741 367 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 AGTR2P50052 363 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 RAP1GDS1P52306 607 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 DNAL1Q4LDG9 190 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 CACHD1Q5VU97 1274 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 PRAMEF13Q5VWM6 474 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 FCRL6Q6DN72 434 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 ZNF425Q6IV72 752 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 FBXO42Q6P3S6 717 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 B3GNT8Q7Z7M8 397 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 KIF2BQ8N4N8 673 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 PTGR2Q8N8N7 351 aaPredicted RBP12.13□□□□□ -0.47
SF3B3-206ENST00000565990 OR6Y1Q8NGX8 325 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 CCDC126Q96EE4 140 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 PHF21BQ96EK2 531 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 L3HYPDHQ96EM0 354 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 WDR34Q96EX3 536 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 MED8Q96G25 268 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 FAM111AQ96PZ2 611 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 C1orf21Q9H246 121 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 TMEM184CQ9NVA4 438 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 ANKMY1Q9P2S6 941 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 COPG2Q9UBF2 871 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 TAC3Q9UHF0 121 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 HAO1Q9UJM8 370 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 PILRAQ9UKJ1 303 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 SNX7Q9UNH6 387 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 CLCA2Q9UQC9 943 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 BTRCQ9Y297 605 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 KCNE2Q9Y6J6 123 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 ADAMTS20P59510 1910 aa12.13□□□□□ -0.47
SF3B3-206ENST00000565990 SLC9B1P1A6NJY1 282 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 K7EPI3 171 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 PRAMEF4O60810 478 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 SNNO75324 88 aaPredicted RBP12.12□□□□□ -0.47
SF3B3-206ENST00000565990 WDR47O94967 919 aa12.12□□□□□ -0.47
SF3B3-206ENST00000565990 CCNDBP1O95273 360 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms