RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 PRRC2BQ5JSZ5 2229 aaKnown RBP15.81■□□□□ 0.12
LINC00554-201ENST00000564841 MATN3O15232 486 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 NOS1APO75052 506 aaPredicted RBP15.81■□□□□ 0.12
LINC00554-201ENST00000564841 RHOBTB1O94844 696 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 ADORA3P0DMS8 318 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 ZNF250P15622 560 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 CCNCP24863 283 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 PKLRP30613 574 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 IDH2P48735 452 aaKnown RBP15.81■□□□□ 0.12
LINC00554-201ENST00000564841 RGS6P49758 472 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 NKX3-2P78367 333 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 SCAPQ12770 1279 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 TRIM71Q2Q1W2 868 aaKnown RBP15.81■□□□□ 0.12
LINC00554-201ENST00000564841 RFX4Q33E94 735 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 KIAA1614Q5VZ46 1190 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 SLC44A2Q8IWA5 706 aaPredicted RBP15.81■□□□□ 0.12
LINC00554-201ENST00000564841 PRKD2Q9BZL6 878 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 RERGLQ9H628 205 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 SAMHD1Q9Y3Z3 626 aaKnown RBP15.81■□□□□ 0.12
LINC00554-201ENST00000564841 MYO7AQ13402 2215 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 TRAV19A0A0A6YYK7 116 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 CIB4A0PJX0 185 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 SCAMP3O14828 347 aaKnown RBP15.8■□□□□ 0.12
LINC00554-201ENST00000564841 OR1I1O60431 355 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 SLITRK5O94991 958 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 HCAR3P49019 387 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 CDKN1CP49918 316 aaPredicted RBP15.8■□□□□ 0.12
LINC00554-201ENST00000564841 KEAP1Q14145 624 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 GALNT3Q14435 633 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 KIAA0040Q15053 153 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 KDELC1Q6UW63 502 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 SLC24A5Q71RS6 500 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 GPR149Q86SP6 731 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 CACTIN-AS1Q8N1I8 211 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 KBTBD8Q8NFY9 601 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 OR4M2Q8NGB6 313 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 OR8J3Q8NGG0 315 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 STAG3L4Q8TBR4 150 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 ZNF296Q8WUU4 475 aaPredicted RBP15.8■□□□□ 0.12
LINC00554-201ENST00000564841 ZSCAN5AQ9BUG6 496 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 CNPPD1Q9BV87 410 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 BARHL1Q9BZE3 327 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 SLC23A1Q9UHI7 598 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 MED16Q9Y2X0 877 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 HSPB11Q9Y547 144 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 PCDHGA6Q9Y5G7 932 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 PDCD11Q14690 1871 aaKnown RBP15.8■□□□□ 0.12
LINC00554-201ENST00000564841 GFRA2O00451 464 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 CD3EAPO15446 510 aaKnown RBP15.8■□□□□ 0.12
LINC00554-201ENST00000564841 SLC7A4O43246 635 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 TSPAN9O75954 239 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 POLR2CP19387 275 aaPredicted RBP15.8■□□□□ 0.12
LINC00554-201ENST00000564841 ENPP1P22413 925 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 PTGS2P35354 604 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 IL12RB1P42701 662 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 MXD1Q05195 221 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 GRIK2Q13002 908 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 OR2T5Q6IEZ7 315 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 TSPYL5Q86VY4 417 aaPredicted RBP15.8■□□□□ 0.12
LINC00554-201ENST00000564841 OR2T29Q8NH02 315 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 BRSK1Q8TDC3 778 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 ASB15Q8WXK1 588 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 FAM120BQ96EK7 910 aaKnown RBP15.8■□□□□ 0.12
LINC00554-201ENST00000564841 ACBD6Q9BR61 282 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 INPP5KQ9BT40 448 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 C11orf54Q9H0W9 315 aaPredicted RBP15.8■□□□□ 0.12
LINC00554-201ENST00000564841 CCNB1IP1Q9NPC3 277 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 PTCH2Q9Y6C5 1203 aa15.8■□□□□ 0.12
LINC00554-201ENST00000564841 ARNTLO00327 626 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 KERAO60938 352 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 HYAL2Q12891 473 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 NPRL3Q12980 569 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 MED22Q15528 200 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 TSTQ16762 297 aaKnown RBP15.79■□□□□ 0.12
LINC00554-201ENST00000564841 PROX2Q3B8N5 592 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 RUNDC3AQ59EK9 446 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 SNX20Q7Z614 316 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 SLC9A7Q96T83 725 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 GPR21Q99679 349 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 OSER1Q9NX31 292 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 GRIP1Q9Y3R0 1128 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 PNMA8CA0A1B0GUJ8 204 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 PCP4L1A6NKN8 68 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 SNX4O95219 450 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 CHRM5P08912 532 aaPredicted RBP15.79■□□□□ 0.12
LINC00554-201ENST00000564841 MYL9P24844 172 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 ALFQ53S48 1182 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 TMCO2Q7Z6W1 182 aaPredicted RBP15.79■□□□□ 0.12
LINC00554-201ENST00000564841 KLHDC8BQ8IXV7 354 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 CAMKK1Q8N5S9 505 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 NLGN4YQ8NFZ3 816 aaPredicted RBP15.79■□□□□ 0.12
LINC00554-201ENST00000564841 PSMG2Q969U7 264 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 KIAA1191Q96A73 305 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 HMCESQ96FZ2 354 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 EXOC2Q96KP1 924 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 DEFB118Q96PH6 123 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 SYTL2Q9HCH5 934 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 SARS2Q9NP81 518 aaKnown RBP15.79■□□□□ 0.12
LINC00554-201ENST00000564841 EVA1BQ9NVM1 165 aa15.79■□□□□ 0.12
LINC00554-201ENST00000564841 NEU3Q9UQ49 428 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms