RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 FAM109AQ8N4B1 249 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 TTC29Q8NA56 475 aaPredicted RBP9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 C1orf131Q8NDD1 294 aaKnown RBP9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 ZNF606Q8WXB4 792 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 LYSMD1Q96S90 227 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 NUP85Q9BW27 656 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 TTTY12Q9BZ98 90 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 GOLPH3LQ9H4A5 285 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 DEPPQ9NTK1 212 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 SPRR3Q9UBC9 169 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 TRPC4Q9UBN4 977 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 PCDHB10Q9UN67 800 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 HEBP2Q9Y5Z4 205 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 MUC4Q99102 2169 aa9.84□□□□□ -0.83
HDGFL3-204ENST00000563790 AHRRA9YTQ3 701 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 FOXN3O00409 490 aaPredicted RBP9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 PMM2O15305 246 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 HCN1O60741 890 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 LETM1O95202 739 aaPredicted RBP9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 MT-CYBP00156 380 aaPredicted RBP9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 PLAUP00749 431 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 TGFAP01135 160 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 RPL13P26373 211 aaKnown RBP9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 MAGEA5P43359 124 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 CCR8P51685 355 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 LOXL3P58215 753 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 TMEM115Q12893 351 aaPredicted RBP9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 KRT33BQ14525 404 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 BEAN1Q3B7T3 259 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 NDUFAF5Q5TEU4 345 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 MDGA2Q7Z553 956 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 ZDHHC17Q8IUH5 632 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 MRAPQ8TCY5 172 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 RXFP2Q8WXD0 754 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 PROX1Q92786 737 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 RMDN2Q96LZ7 410 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 JMJD8Q96S16 334 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 RAB11FIP5Q9BXF6 653 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 CNTN6Q9UQ52 1028 aa9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 DNMT3AQ9Y6K1 912 aaPredicted RBP9.83□□□□□ -0.84
HDGFL3-204ENST00000563790 POM121CA8CG34 1229 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 CDC7O00311 574 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 SCAMP2O15127 329 aaKnown RBP9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 EPHB6O15197 1021 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 DLX3O60479 287 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 ZNF354AO60765 605 aaPredicted RBP9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 TUBB4AP04350 444 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 SLC35G4P0C7Q5 338 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 HSPA9P38646 679 aaKnown RBP9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 KCNC1P48547 511 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 PAPOLAP51003 745 aaKnown RBP9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 GTF2H3Q13889 308 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 NRF1Q16656 503 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 COBLL1Q53SF7 1204 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 RALGPS1Q5JS13 557 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 TRNP1Q6NT89 227 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 LANCL3Q6ZV70 420 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 SLC26A11Q86WA9 606 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 TRAM1L1Q8N609 369 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 OR52E1Q8NGJ3 308 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 METTL21AQ8WXB1 218 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 KREMEN1Q96MU8 473 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 TMEM204Q9BSN7 226 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 LDAHQ9H6V9 325 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 MANSC1Q9H8J5 431 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 METTL14Q9HCE5 456 aaKnown RBP9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 TMEFF2Q9UIK5 374 aaPredicted RBP9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 ZDHHC9Q9Y397 364 aa9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 MAGED1Q9Y5V3 778 aaPredicted RBP9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.82□□□□□ -0.84
HDGFL3-204ENST00000563790 ARFGEF3Q5TH69 2177 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 C1orf232A0A0U1RR37 186 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 ARHGAP42A6NI28 874 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 FFAR3O14843 346 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 GPR42O15529 346 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 RGS9O75916 674 aaPredicted RBP9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 PRB2P02812 416 aaPredicted RBP9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 CYC1P08574 325 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 CELA3AP09093 270 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 DPP4P27487 766 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 GCH1P30793 250 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 PRCPP42785 496 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 PTPN9P43378 593 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 NUDT6P53370 316 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 SNX16P57768 344 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 SLC10A7Q0GE19 358 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 RAB6CQ53S08 254 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 BEX5Q5H9J7 111 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 KPRPQ5T749 579 aaPredicted RBP9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 NSUN5P2Q63ZY6 315 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 SARM1Q6SZW1 724 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 DNAJC14Q6Y2X3 702 aaPredicted RBP9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 KRBA2Q6ZNG9 492 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 ARHGEF19Q8IW93 802 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 CCDC116Q8IYX3 515 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 CYP4Z2PQ8N1L4 340 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 TMEM251Q8N6I4 163 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 OR2M7Q8NG81 312 aa9.81□□□□□ -0.84
HDGFL3-204ENST00000563790 BTBD9Q96Q07 612 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms