RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 TRAP1Q12931 704 aaKnown RBP2.58□□□□□ -2
HMGB1P33-201ENST00000563485 ZNF177Q13360 481 aaPredicted RBP2.58□□□□□ -2
HMGB1P33-201ENST00000563485 TRA2AQ13595 282 aaKnown RBP eCLIP2.58□□□□□ -2
HMGB1P33-201ENST00000563485 BAATQ14032 418 aaPredicted RBP2.58□□□□□ -2
HMGB1P33-201ENST00000563485 OR4A47Q6IF82 309 aa2.58□□□□□ -2
HMGB1P33-201ENST00000563485 CDHR3Q6ZTQ4 885 aa2.58□□□□□ -2
HMGB1P33-201ENST00000563485 IL17RELQ6ZVW7 336 aa2.58□□□□□ -2
HMGB1P33-201ENST00000563485 CEACAM19Q7Z692 300 aa2.58□□□□□ -2
HMGB1P33-201ENST00000563485 NDUFAF2Q8N183 169 aa2.58□□□□□ -2
HMGB1P33-201ENST00000563485 RSRC1Q96IZ7 334 aaKnown RBP2.58□□□□□ -2
HMGB1P33-201ENST00000563485 C1orf147Q96MC9 270 aaPredicted RBP2.58□□□□□ -2
HMGB1P33-201ENST00000563485 CHCHD5Q9BSY4 110 aa2.58□□□□□ -2
HMGB1P33-201ENST00000563485 MRPL1Q9BYD6 325 aaKnown RBP2.58□□□□□ -2
HMGB1P33-201ENST00000563485 MTHFD2LQ9H903 347 aaPredicted RBP2.58□□□□□ -2
HMGB1P33-201ENST00000563485 PDE7BQ9NP56 450 aa2.58□□□□□ -2
HMGB1P33-201ENST00000563485 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.58□□□□□ -2
HMGB1P33-201ENST00000563485 LNPEPQ9UIQ6 1025 aa2.58□□□□□ -2
HMGB1P33-201ENST00000563485 PCDHGB4Q9UN71 923 aa2.58□□□□□ -2
HMGB1P33-201ENST00000563485 PA2G4Q9UQ80 394 aaKnown RBP2.58□□□□□ -2
HMGB1P33-201ENST00000563485 RPS6KL1Q9Y6S9 549 aa2.58□□□□□ -2
HMGB1P33-201ENST00000563485 RSF1Q96T23 1441 aaPredicted RBP2.58□□□□□ -2
HMGB1P33-201ENST00000563485 A0A1W2PPK0 400 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 TRIM77I1YAP6 450 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 CCL24O00175 119 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 GPRIN2O60269 458 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 GALR3O60755 368 aaPredicted RBP2.57□□□□□ -2
HMGB1P33-201ENST00000563485 PORP16435 677 aaPredicted RBP2.57□□□□□ -2
HMGB1P33-201ENST00000563485 EIF2DP41214 584 aaKnown RBP2.57□□□□□ -2
HMGB1P33-201ENST00000563485 SGCGQ13326 291 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 CUL3Q13618 768 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 MEA1Q16626 185 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 MS4A18Q3C1V0 323 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 RILPL1Q5EBL4 403 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 FCRLAQ7L513 359 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 TIPARPQ7Z3E1 657 aaKnown RBP2.57□□□□□ -2
HMGB1P33-201ENST00000563485 FAM89BQ8N5H3 189 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 SUMF1Q8NBK3 374 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 TYMSOSQ8TAI1 123 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 ATL1Q8WXF7 558 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 PIK3R3Q92569 461 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 JAKMIP2Q96AA8 810 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 MOB3AQ96BX8 217 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 ZNF830Q96NB3 372 aaPredicted RBP2.57□□□□□ -2
HMGB1P33-201ENST00000563485 PRRG4Q9BZD6 226 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 HAO2Q9NYQ3 351 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 MRPL15Q9P015 296 aaKnown RBP2.57□□□□□ -2
HMGB1P33-201ENST00000563485 SLC24A2Q9UI40 661 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 SELENOKQ9Y6D0 94 aa2.57□□□□□ -2
HMGB1P33-201ENST00000563485 IGLV4-3A0A075B6K6 122 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 CASTOR2A6NHX0 329 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 C2CD4DB7Z1M9 353 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 PHF1O43189 567 aaPredicted RBP2.56□□□□□ -2
HMGB1P33-201ENST00000563485 TLX2O43763 284 aaPredicted RBP2.56□□□□□ -2
HMGB1P33-201ENST00000563485 NXPH4O95158 308 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 ALOX12P18054 663 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 CD22P20273 847 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 ALDH1B1P30837 517 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 LHX1P48742 406 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 DCDC1P59894 354 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 TRA2BP62995 288 aaKnown RBP2.56□□□□□ -2
HMGB1P33-201ENST00000563485 UBXN2AP68543 259 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 CUL4AQ13619 759 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 SPECC1Q5M775 1068 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 C6orf163Q5TEZ5 329 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 SLC24A5Q71RS6 500 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 DNAAF5Q86Y56 855 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 TDRD5Q8NAT2 981 aaKnown RBP2.56□□□□□ -2
HMGB1P33-201ENST00000563485 EVI5LQ96CN4 794 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 ABHD1Q96SE0 405 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 SLC2A11Q9BYW1 496 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 ADNPQ9H2P0 1102 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 ANKZF1Q9H8Y5 726 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 OLAHQ9NV23 265 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 GTSE1Q9NYZ3 720 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.56□□□□□ -2
HMGB1P33-201ENST00000563485 BAIAP2L1Q9UHR4 511 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 ZNF107Q9UII5 783 aaPredicted RBP2.56□□□□□ -2
HMGB1P33-201ENST00000563485 CPSF3Q9UKF6 684 aaKnown RBP2.56□□□□□ -2
HMGB1P33-201ENST00000563485 PRDM4Q9UKN5 801 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 TSPAN16Q9UKR8 245 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 IGSF1Q8N6C5 1336 aa2.56□□□□□ -2
HMGB1P33-201ENST00000563485 PTGESO14684 152 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 SURF4O15260 269 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 ACSL3O95573 720 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 BAG3O95817 575 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 HPP00738 406 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 SELEP16581 610 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 AOC1P19801 751 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 PAX3P23760 479 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 GEMIN4P57678 1058 aaKnown RBP2.55□□□□□ -2
HMGB1P33-201ENST00000563485 STK4Q13043 487 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 SRSF9Q13242 221 aaKnown RBP eCLIP2.55□□□□□ -2
HMGB1P33-201ENST00000563485 IL11RAQ14626 422 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 GON4LQ3T8J9 2241 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 ITPRIPL1Q6GPH6 555 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 C3P1Q6ZMU1 363 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 KCNMB4Q86W47 210 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 OR4N5Q8IXE1 308 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 PHC2Q8IXK0 858 aa2.55□□□□□ -2
HMGB1P33-201ENST00000563485 NOA1Q8NC60 698 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms