RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 SRP54P61011 504 aaKnown RBP9.37□□□□□ -0.91
UBFD1-202ENST00000563366 KCNJ2P63252 427 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 TAP2Q03519 686 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 FZD5Q13467 585 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 ART3Q13508 389 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 ABRAXAS2Q15018 415 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 CYP2A13Q16696 494 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 AP5B1Q2VPB7 878 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 AGKQ53H12 422 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 ATG9BQ674R7 924 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 MED27Q6P2C8 311 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 ABRAXAS1Q6UWZ7 409 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 Q6ZSR6 202 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 Q6ZSR9 355 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 TMPRSS11BQ86T26 416 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 IQCHQ86VS3 1027 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 C17orf64Q86WR6 236 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 ZFAND4Q86XD8 727 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 KIF2BQ8N4N8 673 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 KYQ8NBH2 561 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 GLB1L3Q8NCI6 653 aaPredicted RBP9.37□□□□□ -0.91
UBFD1-202ENST00000563366 HMGCLL1Q8TB92 370 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 SLC5A11Q8WWX8 675 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 BIRC7Q96CA5 298 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 PDXPQ96GD0 296 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 FERD3LQ96RJ6 166 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 ZBTB18Q99592 522 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 FOXQ1Q9C009 403 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 C6orf106Q9H6K1 298 aaPredicted RBP9.37□□□□□ -0.91
UBFD1-202ENST00000563366 LRTM1Q9HBL6 345 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 SLC40A1Q9NP59 571 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 CD93Q9NPY3 652 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 TM7SF3Q9NS93 570 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 IMP3Q9NV31 184 aaKnown RBP9.37□□□□□ -0.91
UBFD1-202ENST00000563366 C1orf109Q9NX04 203 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 CCDC167Q9P0B6 97 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 G3BP2Q9UN86 482 aaKnown RBP9.37□□□□□ -0.91
UBFD1-202ENST00000563366 KCNK6Q9Y257 313 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 TDRKHQ9Y2W6 561 aaKnown RBP9.37□□□□□ -0.91
UBFD1-202ENST00000563366 NDUFAF1Q9Y375 327 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 SIT1Q9Y3P8 196 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 TSC22D4Q9Y3Q8 395 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 PCYT1BQ9Y5K3 369 aaPredicted RBP9.37□□□□□ -0.91
UBFD1-202ENST00000563366 PTGDR2Q9Y5Y4 395 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 FANCMQ8IYD8 2048 aa9.37□□□□□ -0.91
UBFD1-202ENST00000563366 UNC80Q8N2C7 3258 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 KCNE1BA0A087WTH5 132 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 SPTY2D1-AS1A0A0U1RR47 76 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 LOC100653049A0A140TA62 436 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 OR5K4A6NMS3 321 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 E7EQ34 232 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 ANGPT2O15123 496 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 SLC22A3O75751 556 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 CIB2O75838 187 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 KRT34O76011 436 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 CCNDBP1O95273 360 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 NPPAP01160 153 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 PDYNP01213 254 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 FUCA1P04066 466 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 C1GALT1C1LP0DN25 315 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 VSIG8P0DPA2 414 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 ARAFP10398 606 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 MTHFD1P11586 935 aaKnown RBP9.36□□□□□ -0.91
UBFD1-202ENST00000563366 F3P13726 295 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 NPPBP16860 134 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 GPX3P22352 226 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 HRH2P25021 359 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 CD27P26842 260 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 RPL10P27635 214 aaKnown RBP9.36□□□□□ -0.91
UBFD1-202ENST00000563366 SHMT2P34897 504 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 CPA2P48052 419 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 CXCL12P48061 93 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 HTR6P50406 440 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 GPLD1P80108 840 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 PRKG2Q13237 762 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 RIPK1Q13546 671 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 TSTA3Q13630 321 aaPredicted RBP9.36□□□□□ -0.91
UBFD1-202ENST00000563366 DOC2AQ14183 400 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 RCAN2Q14206 197 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 GRB7Q14451 532 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 ZXDCQ2QGD7 858 aaPredicted RBP9.36□□□□□ -0.91
UBFD1-202ENST00000563366 CCSMST1Q4G0I0 132 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 USP39Q53GS9 565 aaKnown RBP9.36□□□□□ -0.91
UBFD1-202ENST00000563366 TCHHL1Q5QJ38 904 aaPredicted RBP9.36□□□□□ -0.91
UBFD1-202ENST00000563366 HACD2Q6Y1H2 254 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 SLCO4C1Q6ZQN7 724 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 RINLQ6ZS11 566 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 PARGQ86W56 976 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 LONP2Q86WA8 852 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 C10orf67Q8IYJ2 551 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 PHACTR4Q8IZ21 702 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 PGAM4Q8N0Y7 254 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 KRT78Q8N1N4 520 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 POU5F2Q8N7G0 328 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 AVL9Q8NBF6 648 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 OR2L8Q8NGY9 312 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 OR2T11Q8NH01 316 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 ZFPM2Q8WW38 1151 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 OR1E3Q8WZA6 343 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 STARD8Q92502 1023 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms