RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 SIDT1Q9NXL6 827 aaKnown RBP18.06■□□□□ 0.48
RAB40C-207ENST00000563109 PISDQ9UG56 409 aa18.06■□□□□ 0.48
RAB40C-207ENST00000563109 KLK13Q9UKR3 277 aa18.06■□□□□ 0.48
RAB40C-207ENST00000563109 PLCL2Q9UPR0 1127 aa18.06■□□□□ 0.48
RAB40C-207ENST00000563109 HAT1O14929 419 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 PRAMEF10O60809 474 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 SUPT7LO94864 414 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 ADRB1P08588 477 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 MSL3P1P0C860 447 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 C1GALT1C1LP0DN25 315 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 HGFP14210 728 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 FOLR1P15328 257 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 CXCR2P25025 360 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 HPDP32754 393 aaPredicted RBP18.05■□□□□ 0.48
RAB40C-207ENST00000563109 MAPK10P53779 464 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 RAB15P59190 212 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 DNAJB13P59910 316 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 RPS15AP62244 130 aaKnown RBP18.05■□□□□ 0.48
RAB40C-207ENST00000563109 SH3BP2P78314 561 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 GABREP78334 506 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 CSNK1G2P78368 415 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 IRF8Q02556 426 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 GPR19Q15760 415 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 RBBP7Q16576 425 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 DEFB110Q30KQ9 67 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 XKR6Q5GH73 641 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 ATG9BQ674R7 924 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 C10orf107Q8IVU9 208 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 KRT78Q8N1N4 520 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 DNAJC22Q8N4W6 341 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 CCNYL1Q8N7R7 359 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 ZNF483Q8TF39 744 aaPredicted RBP18.05■□□□□ 0.48
RAB40C-207ENST00000563109 ATP6V1E2Q96A05 226 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 PTCD3Q96EY7 689 aaKnown RBP18.05■□□□□ 0.48
RAB40C-207ENST00000563109 OR6C1Q96RD1 312 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 EHD1Q9H4M9 534 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 IPPKQ9H8X2 491 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 POLR1BQ9H9Y6 1135 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 FAM60AQ9NP50 221 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 FGF21Q9NSA1 209 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 IRAK4Q9NWZ3 460 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 SLC39A1Q9NY26 324 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 RARRES3Q9UL19 164 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 STK38LQ9Y2H1 464 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 NEUROG3Q9Y4Z2 214 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 HEATR5BQ9P2D3 2071 aa18.05■□□□□ 0.48
RAB40C-207ENST00000563109 A0A0J9YVX5 310 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 TMEM150CB9EJG8 249 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 TRIM13O60858 407 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 CCL4P13236 92 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 ITIH1P19827 911 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 ALDH3A1P30838 453 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 ETV4P43268 484 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 SERPINB4P48594 390 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 CCNG1P51959 295 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 SLC18A1P54219 525 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 REEP5Q00765 189 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 MC2RQ01718 297 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 RELAQ04206 551 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 CYP4F3Q08477 520 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 CHIT1Q13231 466 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 LAPTM5Q13571 262 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 SLBPQ14493 270 aaKnown RBP eCLIP18.04■□□□□ 0.48
RAB40C-207ENST00000563109 IL11RAQ14626 422 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 PAGE2BQ5JRK9 111 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 HHATQ5VTY9 493 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 SLCO4C1Q6ZQN7 724 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 BPHLQ86WA6 291 aaPredicted RBP18.04■□□□□ 0.48
RAB40C-207ENST00000563109 BMPERQ8N8U9 685 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 OR4K1Q8NGD4 311 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 OR8K5Q8NH50 307 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 RERGQ96A58 199 aaPredicted RBP18.04■□□□□ 0.48
RAB40C-207ENST00000563109 NXPE2Q96DL1 559 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 EFCAB11Q9BUY7 163 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 SCNM1Q9BWG6 230 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 DRC3Q9H069 523 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 ACTR8Q9H981 624 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 SEMA4BQ9NPR2 832 aaPredicted RBP18.04■□□□□ 0.48
RAB40C-207ENST00000563109 FBXO8Q9NRD0 319 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 PCDHGA8Q9Y5G5 932 aa18.04■□□□□ 0.48
RAB40C-207ENST00000563109 TRBC2A0A5B9 178 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 POLR1CO15160 346 aaPredicted RBP18.03■□□□□ 0.48
RAB40C-207ENST00000563109 NRP2O60462 931 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 CTSVO60911 334 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 MLYCDO95822 493 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 OTCP00480 354 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 BPGMP07738 259 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 FGF3P11487 239 aaPredicted RBP18.03■□□□□ 0.48
RAB40C-207ENST00000563109 NEFHP12036 1026 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 EPORP19235 508 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 VARSP26640 1264 aaKnown RBP18.03■□□□□ 0.48
RAB40C-207ENST00000563109 NAGLUP54802 743 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 MEF2AQ02078 507 aaPredicted RBP18.03■□□□□ 0.48
RAB40C-207ENST00000563109 CLCQ05315 142 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 TBCCQ15814 346 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 HIST2H2ACQ16777 129 aaPredicted RBP18.03■□□□□ 0.48
RAB40C-207ENST00000563109 KIF26BQ2KJY2 2108 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 UNC50Q53HI1 259 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 DCAF12Q5T6F0 453 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 TMEM164Q5U3C3 297 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms