RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 TRAF4Q9BUZ4 470 aaPredicted RBP13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 DYRK4Q9NR20 520 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 AIG1Q9NVV5 245 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 STOML2Q9UJZ1 356 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 PCDHB7Q9Y5E2 793 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 HSPE1-MOB4S4R3N1 261 aa13.63□□□□□ -0.23
GTF3C1-203ENST00000562609 ARVCFO00192 962 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 KIAA0513O60268 411 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 SLC22A5O76082 557 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 HLA-DQB2P05538 268 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 FGF4P08620 206 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 GNPDA1P46926 289 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 FAM189BP81408 668 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 TAF10Q12962 218 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 DUSP4Q13115 394 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 KANK2Q63ZY3 851 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 PKN3Q6P5Z2 889 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 TMC8Q8IU68 726 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 RDH10Q8IZV5 341 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 OR2T12Q8NG77 320 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 GPR151Q8TDV0 419 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 HERVK_113Q902F9 699 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 FAM162AQ96A26 154 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 ZNF583Q96ND8 569 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 TRHDEQ9UKU6 1024 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 J3KR12 359 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 NDUFA2O43678 99 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 SLC11A1P49279 550 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 HOXC5Q00444 222 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 SCN1BQ07699 218 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 ITKQ08881 620 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 TIGD3Q6B0B8 471 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 TIGD7Q6NT04 549 aaPredicted RBP13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 SCIMPQ6UWF3 145 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 DLEU7Q6UYE1 221 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 MON1AQ86VX9 555 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 PTGR2Q8N8N7 351 aaPredicted RBP13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 OR10Q1Q8NGQ4 319 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 DNASE1L2Q92874 299 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 FBXO32Q969P5 355 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 PABPC5Q96DU9 382 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 HHIPL1Q96JK4 782 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 FICDQ9BVA6 458 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 C11orf54Q9H0W9 315 aaPredicted RBP13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 GORASP2Q9H8Y8 452 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 AMBNQ9NP70 447 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 VNN3Q9NY84 501 aa13.62□□□□□ -0.23
GTF3C1-203ENST00000562609 NYNRINQ9P2P1 1898 aaKnown RBP13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 A0A1B0GTL3 188 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 WBP4O75554 376 aaKnown RBP13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 GJB3O75712 270 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 CLEC2LP0C7M8 214 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 HSMCR30P0CW71 290 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 HAPLN1P10915 354 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 SELPP16109 830 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 TBX4P57082 545 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 ZNF79Q15937 498 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 ATP6AP1LQ52LC2 224 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 C10orf120Q5SQS8 335 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 BRAT1Q6PJG6 821 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 C16orf62Q7Z3J2 963 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 DEFB128Q7Z7B8 93 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 LINC00518Q8N0U6 118 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 CDYL2Q8N8U2 506 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 ANKRD53Q8N9V6 530 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 TTC29Q8NA56 475 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 ZBTB44Q8NCP5 570 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 BLOC1S5Q8TDH9 187 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 FBXW5Q969U6 566 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 REPS1Q96D71 796 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 MYEOVQ96EZ4 313 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 VAT1Q99536 393 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 SPATA9Q9BWV2 254 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 MCCC2Q9HCC0 563 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 SMURF1Q9HCE7 757 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 ASAH2Q9NR71 780 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 ABCB8Q9NUT2 735 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 TMEM161AQ9NX61 479 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 V9GYH0 126 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 FRMPD3Q5JV73 1810 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 CRCPO75575 148 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 PAPSS2O95340 614 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 GPR158Q5T848 1215 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 MANEALQ5VSG8 457 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 PRSS42Q7Z5A4 293 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 SPATA19Q7Z5L4 167 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 RYBPQ8N488 228 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 C2CD4AQ8NCU7 369 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 NUDT8Q8WV74 236 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 DNAJA4Q8WW22 397 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 GIMAP5Q96F15 307 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 SERPINB11Q96P15 392 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 TBCDQ9BTW9 1192 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 GTPBP2Q9BX10 602 aaKnown RBP13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 CATSPERBQ9H7T0 1116 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 CCSER2Q9H7U1 834 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 MARCH5Q9NX47 278 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 SCN5AQ14524 2016 aa13.61□□□□□ -0.23
GTF3C1-203ENST00000562609 ARPC4-TTLL3A0A0A6YYG9 625 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms