RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 RUNDC3BQ96NL0 473 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 MESP1Q9BRJ9 268 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 ZNF304Q9HCX3 659 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 CCDC177Q9NQR7 707 aaPredicted RBP16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 NXT1Q9UKK6 140 aaKnown RBP16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 SH2B3Q9UQQ2 575 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 HS3ST3B1Q9Y662 390 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 TEX264Q9Y6I9 313 aa16.4■□□□□ 0.22
CDC42BPB-208ENST00000561271 USP9YO00507 2555 aaPredicted RBP16.39■□□□□ 0.22
CDC42BPB-208ENST00000561271 CCDC188H7C350 402 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 FFAR3O14843 346 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 GPR42O15529 346 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 SEC31AO94979 1220 aaKnown RBP16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 IGHEP01854 428 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 AHSGP02765 367 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 CD97P48960 835 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 RGS4P49798 205 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 MYBPC3Q14896 1274 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 RBBP7Q16576 425 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 PHKG1Q16816 387 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 PRAMEF13Q5VWM6 474 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 STEAP4Q687X5 459 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 JMJD6Q6NYC1 403 aaPredicted RBP16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 PRMT9Q6P2P2 845 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 KIAA0408Q6ZU52 694 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 ATCAYQ86WG3 371 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 ANKMY2Q8IV38 441 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 MYO1HQ8N1T3 1032 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 GPATCH11Q8N954 259 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 Q8NA96 180 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 CPT1CQ8TCG5 803 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 STT3BQ8TCJ2 826 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 RERGQ96A58 199 aaPredicted RBP16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 SNF8Q96H20 258 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 OR2A5Q96R48 311 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 CRB3Q9BUF7 120 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 PDE10AQ9Y233 779 aa16.39■□□□□ 0.21
CDC42BPB-208ENST00000561271 VSTM2BA6NLU5 285 aa16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 TP73O15350 636 aa16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 C8GP07360 202 aa16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 ITGA3P26006 1051 aa16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 UQCRFS1P47985 274 aa16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 ARL4CP56559 192 aa16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 ABATP80404 500 aa16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 MRPS25P82663 173 aaKnown RBP16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 KLC1Q07866 573 aa16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 SP140Q13342 867 aa16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 FASTKD3Q14CZ7 662 aaKnown RBP16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 TEDDM1Q5T9Z0 273 aa16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 KIRREL2Q6UWL6 708 aa16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 GALNT7Q86SF2 657 aa16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 EFCAB3Q8N7B9 438 aa16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 KRT12Q99456 494 aa16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 UTP6Q9NYH9 597 aaKnown RBP16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 ZNF282Q9UDV7 671 aaPredicted RBP16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 DIDO1Q9BTC0 2240 aaKnown RBP16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 NAV2Q8IVL1 2488 aa16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 UTP20O75691 2785 aaKnown RBP16.38■□□□□ 0.21
CDC42BPB-208ENST00000561271 EFCAB8A8MWE9 144 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 H7BY64 318 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 TSPAN12O95859 305 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 ALPPP05187 535 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 FDXRP22570 491 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 PAFAH1B1P43034 410 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 RPL21P46778 160 aaKnown RBP16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 OCA2Q04671 838 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 AIMP2Q13155 320 aaKnown RBP16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 PDAP1Q13442 181 aaKnown RBP16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 DSG2Q14126 1118 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 TUBB8Q3ZCM7 444 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 VWA2Q5GFL6 755 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 HECTD2Q5U5R9 776 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 AGTRAPQ6RW13 159 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 HPS6Q86YV9 775 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 PALM2Q8IXS6 379 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 MCOLN3Q8TDD5 553 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 PNPLA2Q96AD5 504 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 ALKBH8Q96BT7 664 aaKnown RBP16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 MIEF2Q96C03 454 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 PRAP1Q96NZ9 151 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 OLFM1Q99784 485 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 ATG10Q9H0Y0 220 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 ZNF552Q9H707 407 aaPredicted RBP16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 ATP13A2Q9NQ11 1180 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 SEMA3GQ9NS98 782 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 C5AR2Q9P296 337 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 TRPC4Q9UBN4 977 aa16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 MRPS2Q9Y399 296 aaKnown RBP16.37■□□□□ 0.21
CDC42BPB-208ENST00000561271 ZGLP1P0C6A0 271 aa16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 EMP3P54852 163 aa16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 SNRPNP63162 240 aaKnown RBP16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 PDIA2Q13087 525 aaKnown RBP16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 ARHGEF39Q8N4T4 335 aa16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 AMER3Q8N944 861 aa16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 FBXO36Q8NEA4 188 aa16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 OR11G2Q8NGC1 345 aa16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 C8orf44Q96CB5 159 aa16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 LRRC39Q96DD0 335 aa16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 MMABQ96EY8 250 aaPredicted RBP16.36■□□□□ 0.21
CDC42BPB-208ENST00000561271 CCDC138Q96M89 665 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms