RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 UNC119BA6NIH7 251 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ZNF716A6NP11 495 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SUPT3HB4E1H0 165 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 BTBD19C9JJ37 291 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 HSPB6O14558 160 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 OGTO15294 1046 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CHADO15335 359 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 INPPL1O15357 1258 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 YKT6O15498 198 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CFLARO15519 480 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SCO2O43819 266 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 EXTL3O43909 919 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 KLK8O60259 260 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 GPRIN2O60269 458 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PRAF2O60831 178 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CSDE1O75534 798 aaKnown RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 CREG1O75629 220 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 NCR1O76036 304 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 KDM4BO94953 1096 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SPDEFO95238 335 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CXCL14O95715 111 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 GSRP00390 522 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 OTCP00480 354 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 APOA1P02647 267 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 MBPP02686 304 aaPredicted RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 APRTP07741 180 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ELANEP08246 267 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SERPINF2P08697 491 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ALPIP09923 528 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 HIST1H2AGP0C0S8 130 aaPredicted RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 DANCRP0C864 163 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 MYZAPP0CAP1 466 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ZNF735P0CB33 412 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 HSMCR30P0CW71 290 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CYP2D6P10635 497 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PNMTP11086 282 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ITGAMP11215 1152 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CETPP11597 493 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 F3P13726 295 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 APEHP13798 732 aaKnown RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 ZNF44P15621 663 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 MX1P20591 662 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 S1PR1P21453 382 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PRKACBP22694 351 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 JAK1P23458 1154 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 DGKAP23743 735 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 IGFBP6P24592 240 aaPredicted RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 CD1BP29016 333 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PTPN4P29074 926 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PTPN6P29350 595 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 BDKRB2P30411 391 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SSTR4P31391 388 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 NF2P35240 595 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SFTPDP35247 375 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PTGER3P43115 390 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CDX1P47902 265 aaPredicted RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 ALDH7A1P49419 539 aaKnown RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 CCT8P50990 548 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 HNRNPMP52272 730 aaKnown RBP eCLIP1.95□□□□□ -2.1
RTF1-207ENST00000561076 THOP1P52888 689 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CTSCP53634 463 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CDH12P55289 794 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SLC8A3P57103 927 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 RGS8P57771 180 aaPredicted RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 NLRP11P59045 1033 aaKnown RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 UBE2HP62256 183 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PPP2CBP62714 309 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PPP2CAP67775 309 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PHEXP78562 749 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 BNC1Q01954 994 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 RELQ04864 619 aaPredicted RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 EGR4Q05215 589 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CACNG1Q06432 222 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 TGM3Q08188 693 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CRYZQ08257 329 aaKnown RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 GAGE2BQ13066 116 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 KEAP1Q14145 624 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 DOC2BQ14184 412 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SSPNQ14714 243 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 NONOQ15233 471 aaKnown RBP eCLIP1.95□□□□□ -2.1
RTF1-207ENST00000561076 PTPRRQ15256 657 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 TRIP10Q15642 601 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CSRP2Q16527 193 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CAMK4Q16566 473 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PTGISQ16647 500 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 GAGE2EQ4V326 116 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ASPRV1Q53RT3 343 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ARMCX4Q5H9R4 360 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 FSCBQ5H9T9 825 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ZNF311Q5JNZ3 666 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 AARS2Q5JTZ9 985 aaKnown RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 RABGAP1LQ5R372 815 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ELFN2Q5R3F8 820 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 DDI2Q5TDH0 399 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PRAMEF5Q5TYX0 476 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 AGAP6Q5VW22 663 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 TAF3Q5VWG9 929 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PRAMEF6Q5VXH4 476 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 NSUN5P2Q63ZY6 315 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 TBC1D9BQ66K14 1250 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms