RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 UTP6Q9NYH9 597 aaKnown RBP17.55■□□□□ 0.4
TPM1-226ENST00000560959 NEU2Q9Y3R4 380 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 FAM221AA4D161 298 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 ERI2A8K979 691 aaKnown RBP17.54■□□□□ 0.4
TPM1-226ENST00000560959 A8MUI8 341 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 FAM227AF5H4B4 570 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 CBFA2T2O43439 604 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 PKMP14618 531 aaKnown RBP17.54■□□□□ 0.4
TPM1-226ENST00000560959 CD46P15529 392 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 ADRA1DP25100 572 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 MEP1AQ16819 746 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 CPEB2Q7Z5Q1 589 aaKnown RBP17.54■□□□□ 0.4
TPM1-226ENST00000560959 DOLPP1Q86YN1 238 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 BEST3Q8N1M1 668 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 GHDCQ8N2G8 530 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 HORMAD2Q8N7B1 307 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 FAM71DQ8N9W8 422 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 AGAP11Q8TF27 550 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 FRMD6Q96NE9 622 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 SIGLEC12Q96PQ1 595 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 OR2A5Q96R48 311 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 CYTH2Q99418 400 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 UTP23Q9BRU9 249 aaKnown RBP17.54■□□□□ 0.4
TPM1-226ENST00000560959 PIH1D1Q9NWS0 290 aaKnown RBP17.54■□□□□ 0.4
TPM1-226ENST00000560959 C19orf25Q9UFG5 118 aaPredicted RBP17.54■□□□□ 0.4
TPM1-226ENST00000560959 ANAPC5Q9UJX4 755 aa17.54■□□□□ 0.4
TPM1-226ENST00000560959 CACNA1CQ13936 2221 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 NIPBLQ6KC79 2804 aaeCLIP17.53■□□□□ 0.4
TPM1-226ENST00000560959 FOXO6A8MYZ6 492 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 NPIPA5E9PKD4 350 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 FFAR3O14843 346 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 GPR42O15529 346 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 TSPAN12O95859 305 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 ERGP11308 486 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 ABOP16442 354 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 IGFBP2P18065 325 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 CD96P40200 585 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 EFNA3P52797 238 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 RWDD2BP57060 319 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 BTBD16Q32M84 506 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 CCSMST1Q4G0I0 132 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 PAQR7Q86WK9 346 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 KRT222Q8N1A0 295 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 DNAAF3Q8N9W5 541 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 FAM98AQ8NCA5 519 aaKnown RBP17.53■□□□□ 0.4
TPM1-226ENST00000560959 OR6P1Q8NGX9 317 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 M1APQ8TC57 530 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 TRIM51Q9BSJ1 452 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 VN1R1Q9GZP7 353 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 MRPS30Q9NP92 439 aaKnown RBP17.53■□□□□ 0.4
TPM1-226ENST00000560959 COQ3Q9NZJ6 369 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 TNFRSF10DQ9UBN6 386 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 SLC2A6Q9UGQ3 507 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 NPIPA1Q9UND3 350 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 NFS1Q9Y697 457 aa17.53■□□□□ 0.4
TPM1-226ENST00000560959 SYCE3A1L190 88 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 H0YIG0 161 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 PRRG2O14669 202 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 ADAM10O14672 748 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 SUN1O94901 812 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 MATN4O95460 622 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 EZRP15311 586 aaKnown RBP17.52■□□□□ 0.4
TPM1-226ENST00000560959 TTPAP49638 278 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 YBX1P67809 324 aaKnown RBP17.52■□□□□ 0.4
TPM1-226ENST00000560959 PRAMEP78395 509 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 FASTKQ14296 549 aaKnown RBP17.52■□□□□ 0.4
TPM1-226ENST00000560959 SEMA3AQ14563 771 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 ARHGAP19Q14CB8 494 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 OR1C1Q15619 314 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 EXT1Q16394 746 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 NDUFA9Q16795 377 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 HKDC1Q2TB90 917 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 PTRHD1Q6GMV3 140 aaKnown RBP17.52■□□□□ 0.4
TPM1-226ENST00000560959 ZNF425Q6IV72 752 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 OTOAQ7RTW8 1153 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 LRRC6Q86X45 466 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 CNGA4Q8IV77 575 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 VSTM4Q8IW00 320 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 CHERPQ8IWX8 916 aaKnown RBP17.52■□□□□ 0.4
TPM1-226ENST00000560959 OR52K1Q8NGK4 314 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 SMPDL3AQ92484 453 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 RERGQ96A58 199 aaPredicted RBP17.52■□□□□ 0.4
TPM1-226ENST00000560959 TMUB1Q9BVT8 246 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 P2RY12Q9H244 342 aa17.52■□□□□ 0.4
TPM1-226ENST00000560959 A0A0A6YYC8 382 aaPredicted RBP17.51■□□□□ 0.39
TPM1-226ENST00000560959 IGKV1-8A0A0C4DH67 115 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 SOWAHDA6NJG2 315 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 I3L1I5 382 aaPredicted RBP17.51■□□□□ 0.39
TPM1-226ENST00000560959 SEC24DO94855 1032 aaPredicted RBP17.51■□□□□ 0.39
TPM1-226ENST00000560959 RPS3P23396 243 aaKnown RBP eCLIP17.51■□□□□ 0.39
TPM1-226ENST00000560959 BDKRB1P46663 353 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 AVPR1BP47901 424 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 AGTR2P50052 363 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 PRDX1Q06830 199 aaKnown RBP17.51■□□□□ 0.39
TPM1-226ENST00000560959 PTK6Q13882 451 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 SPINK14Q6IE38 97 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 PCGF5Q86SE9 256 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 LGI4Q8N135 537 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 OR9A1PQ8NGU1 263 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 SKA2Q8WVK7 121 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms