RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 ARHGEF39Q8N4T4 335 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 PTGR2Q8N8N7 351 aaPredicted RBP11.62□□□□□ -0.55
IRF9-211ENST00000560852 RCBTB1Q8NDN9 531 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 ZNF483Q8TF39 744 aaPredicted RBP11.62□□□□□ -0.55
IRF9-211ENST00000560852 MED8Q96G25 268 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 SCYL1Q96KG9 808 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 ATP6V1G3Q96LB4 118 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 LRFN5Q96NI6 719 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 TAAR9Q96RI9 348 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 ZFYVE21Q9BQ24 234 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 EFCAB11Q9BUY7 163 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 SCNM1Q9BWG6 230 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 TMEM121BQ9BXQ6 578 aaPredicted RBP11.62□□□□□ -0.55
IRF9-211ENST00000560852 ZBTB26Q9HCK0 441 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 OCIAD1Q9NX40 245 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 OPTCQ9UBM4 332 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 PCTPQ9UKL6 214 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 PPT2Q9UMR5 302 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 LOXL2Q9Y4K0 774 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 PCDHB3Q9Y5E6 796 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 UNC13CQ8NB66 2214 aa11.62□□□□□ -0.55
IRF9-211ENST00000560852 NCF1BA6NI72 391 aaPredicted RBP11.61□□□□□ -0.55
IRF9-211ENST00000560852 NCF1CA8MVU1 366 aaPredicted RBP11.61□□□□□ -0.55
IRF9-211ENST00000560852 HMGB1P1B2RPK0 211 aaPredicted RBP11.61□□□□□ -0.55
IRF9-211ENST00000560852 H7BY64 318 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 TXNDC9O14530 226 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 DYNC1I1O14576 645 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 MYL2P10916 166 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 CCL4P13236 92 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 NCF1P14598 390 aaPredicted RBP11.61□□□□□ -0.55
IRF9-211ENST00000560852 PVRP15151 417 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 SERPINB5P36952 375 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 HNF4AP41235 474 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 SCTRP47872 440 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 CLDN6P56747 220 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 RPS15AP62244 130 aaKnown RBP11.61□□□□□ -0.55
IRF9-211ENST00000560852 REEP5Q00765 189 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 FOXK2Q01167 660 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 ZNF33BQ06732 778 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 ASPHQ12797 758 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 MAP7Q14244 749 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 PRTGQ2VWP7 1150 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 C18orf21Q32NC0 220 aaPredicted RBP11.61□□□□□ -0.55
IRF9-211ENST00000560852 GGTA1PQ4G0N0 100 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 UNC50Q53HI1 259 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 CCDC157Q569K6 752 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 THEMIS2Q5TEJ8 643 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 TLDC1Q6P9B6 456 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 TRIM73Q86UV7 250 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 MCATQ8IVS2 390 aaKnown RBP11.61□□□□□ -0.55
IRF9-211ENST00000560852 LAS2Q8IYD9 372 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 ARL8AQ96BM9 186 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 PTCD3Q96EY7 689 aaKnown RBP11.61□□□□□ -0.55
IRF9-211ENST00000560852 PRAP1Q96NZ9 151 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 TRMOQ9BU70 441 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 ACAT2Q9BWD1 397 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 IQCGQ9H095 443 aaKnown RBP11.61□□□□□ -0.55
IRF9-211ENST00000560852 RHBGQ9H310 441 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 ASCL3Q9NQ33 180 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 FGF21Q9NSA1 209 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 CUEDC1Q9NWM3 386 aaPredicted RBP11.61□□□□□ -0.55
IRF9-211ENST00000560852 SERTAD3Q9UJW9 196 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 KLK13Q9UKR3 277 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 STK38LQ9Y2H1 464 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 DYRK1BQ9Y463 629 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 TMEM184BQ9Y519 407 aaPredicted RBP11.61□□□□□ -0.55
IRF9-211ENST00000560852 AP1M2Q9Y6Q5 423 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 KNTC1P50748 2209 aa11.61□□□□□ -0.55
IRF9-211ENST00000560852 TRABD2BA6NFA1 517 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 A8MU76 341 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 H0YIV9 168 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 POLR1CO15160 346 aaPredicted RBP11.6□□□□□ -0.55
IRF9-211ENST00000560852 TRIM13O60858 407 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 SNUPNO95149 360 aaKnown RBP11.6□□□□□ -0.55
IRF9-211ENST00000560852 SIX3O95343 332 aaPredicted RBP11.6□□□□□ -0.55
IRF9-211ENST00000560852 MLYCDO95822 493 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 BPGMP07738 259 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 EBLN1P0CF75 366 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 SERPINB1P30740 379 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 GRK3P35626 688 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 ARL4DP49703 201 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 MAGOHP61326 146 aaKnown RBP11.6□□□□□ -0.55
IRF9-211ENST00000560852 PWP1Q13610 501 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 GTF2H2Q13888 395 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 PCLAFQ15004 111 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 CATSPEREQ5SY80 951 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 GARNL3Q5VVW2 1013 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 LIPMQ5VYY2 423 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 GTF2H2CQ6P1K8 395 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 CEACAM20Q6UY09 585 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 ZNF517Q6ZMY9 492 aaPredicted RBP11.6□□□□□ -0.55
IRF9-211ENST00000560852 RNF165Q6ZSG1 346 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 TAX1BP1Q86VP1 789 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 FAM20CQ8IXL6 584 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 MFSD9Q8NBP5 474 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 TTLQ8NG68 377 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 UBE2E3Q969T4 207 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 ESAMQ96AP7 390 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 PHF21BQ96EK2 531 aa11.6□□□□□ -0.55
IRF9-211ENST00000560852 ZNF578Q96N58 590 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms