RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 NOL11Q9H8H0 719 aaKnown RBP6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 GORASP2Q9H8Y8 452 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 PLSCR3Q9NRY6 295 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 ACOXLQ9NUZ1 547 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 SETD4Q9NVD3 440 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 MAT2BQ9NZL9 334 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 MYOTQ9UBF9 498 aa6.55□□□□□ -1.36
TSPAN3-209ENST00000560715 MAGEB16A2A368 324 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 TYW5A2RUC4 315 aaKnown RBP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 TRIM49D1C9J1S8 452 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 GOLGA8SH3BPF8 625 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 ZBTB5O15062 677 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 PI15O43692 258 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 NPHS1O60500 1241 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 RECQL4O94761 1208 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 ASGR1P07306 291 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 DDOSTP39656 456 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SLC1A6P48664 564 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 NDST1P52848 882 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 PLA2G16P53816 162 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 POLR2GP62487 172 aaKnown RBP eCLIP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SQLEQ14534 574 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 RFTN1Q14699 578 aaPredicted RBP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 HADHQ16836 314 aaKnown RBP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 ZNF181Q2M3W8 571 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 FNBP1LQ5T0N5 605 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 CCNYL2Q5T2Q4 361 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 IRAK1BP1Q5VVH5 260 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 XAF1Q6GPH4 301 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 PRR23BQ6ZRT6 265 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SLC16A12Q6ZSM3 486 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 USP30Q70CQ3 517 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 KANSL1Q7Z3B3 1105 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 TMEM200AQ86VY9 491 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 CAMK1DQ8IU85 385 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 RHPN2Q8IUC4 686 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 OR2T3Q8NH03 318 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 TOP1MTQ969P6 601 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 ASB9Q96DX5 294 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SPACA9Q96E40 222 aaPredicted RBP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 CCDC120Q96HB5 630 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 ZBTB45Q96K62 511 aaPredicted RBP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SYBUQ9NX95 663 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 MRPS17Q9Y2R5 130 aaKnown RBP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 DDTLA6NHG4 134 aaPredicted RBP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 GLOD5A6NK44 160 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SH2D7A6NKC9 451 aaPredicted RBP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 NOS1APO75052 506 aaPredicted RBP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 LYPLA1O75608 230 aaPredicted RBP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 TOM1L1O75674 476 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SCAF4O95104 1147 aaKnown RBP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 TMEM191BP0C7N4 346 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SPNP16150 400 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 CD9P21926 228 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 PROZP22891 400 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SERPINB5P36952 375 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 HSD17B2P37059 387 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SERPINB10P48595 397 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 YPEL5P62699 121 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SULT1C3Q6IMI6 304 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SYCE2Q6PIF2 218 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 TMEM179Q6ZVK1 233 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 POLNQ7Z5Q5 900 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 TLK2Q86UE8 772 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SLC26A11Q86WA9 606 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 GLB1L2Q8IW92 636 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 RNF148Q8N7C7 305 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 MRPL43Q8N983 215 aaKnown RBP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 TP53I13Q8NBR0 393 aaPredicted RBP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 CADM4Q8NFZ8 388 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 RHOXF1Q8NHV9 184 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 RP9Q8TA86 221 aaKnown RBP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 LRRC20Q8TCA0 184 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SEPT8Q92599 483 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SLCO4A1Q96BD0 722 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 FUNDC2Q9BWH2 189 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 P2RY12Q9H244 342 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 TMEM216Q9P0N5 145 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 BAG5Q9UL15 447 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 DNPEPQ9ULA0 475 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 SNX6Q9UNH7 406 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 DRG1Q9Y295 367 aaKnown RBP6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 CROCCQ5TZA2 2017 aa6.54□□□□□ -1.36
TSPAN3-209ENST00000560715 ASTN1O14525 1302 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 KIAA1217Q5T5P2 1943 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 TCRBV9S1A1TA0A576 114 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 SAGE2PA6NJ88 616 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 PDZK1P1A8MUH7 402 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 CFLARO15519 480 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 SLITRK3O94933 977 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 ERCC2P18074 760 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 EEF1B2P24534 225 aaKnown RBP6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 CRHR1P34998 444 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 NUMBP49757 651 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 SCN1BQ07699 218 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 MZT1Q08AG7 82 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 TCP10Q12799 353 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 NTRK2Q16620 822 aa6.53□□□□□ -1.36
TSPAN3-209ENST00000560715 MST1LQ2TV78 715 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms