RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 FCRLBQ6BAA4 426 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 PACS1Q6VY07 963 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 BZW1Q7L1Q6 419 aaKnown RBP9.39□□□□□ -0.91
TPM1-225ENST00000560679 TAS2R42Q7RTR8 314 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 TMEM200AQ86VY9 491 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 ZC3H7AQ8IWR0 971 aaKnown RBP9.39□□□□□ -0.91
TPM1-225ENST00000560679 SLC22A15Q8IZD6 547 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 SHISA5Q8N114 240 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 ARHGEF39Q8N4T4 335 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 NOA1Q8NC60 698 aaKnown RBP9.39□□□□□ -0.91
TPM1-225ENST00000560679 OR2L8Q8NGY9 312 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 LKAAEAR1Q8TD35 194 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 CAPZA3Q96KX2 299 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 OSBPL9Q96SU4 736 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 TGIF2Q9GZN2 237 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 KLHL1Q9NR64 748 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 CCM2LQ9NUG4 571 aaPredicted RBP9.39□□□□□ -0.91
TPM1-225ENST00000560679 C14orf105Q9NVL8 296 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 NLE1Q9NVX2 485 aaPredicted RBP9.39□□□□□ -0.91
TPM1-225ENST00000560679 ANKRD10Q9NXR5 420 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 STMN3Q9NZ72 180 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 TRPC4Q9UBN4 977 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 ZC3H7BQ9UGR2 993 aaKnown RBP9.39□□□□□ -0.91
TPM1-225ENST00000560679 PPT2Q9UMR5 302 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 FAM169AQ9Y6X4 670 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 FN1P02751 2386 aaKnown RBP9.39□□□□□ -0.91
TPM1-225ENST00000560679 SCN2AQ99250 2005 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 hCG_1818297A0A087WSY0 165 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 IGHV3-20A0A0C4DH32 117 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 A0A0J9YVX5 310 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 NKX2-6A6NCS4 301 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 TARM1B6A8C7 271 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 RASGRF2O14827 1237 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 TTI1O43156 1089 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 ASNA1O43681 348 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 KDM1AO60341 852 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 SRPX2O60687 465 aaPredicted RBP9.38□□□□□ -0.91
TPM1-225ENST00000560679 ERLIN1O75477 346 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 TMEM253P0C7T8 217 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 ABOP16442 354 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 SLC26A3P40879 764 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 TFDP2Q14188 446 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 SPARCL1Q14515 664 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 ITIH4Q14624 930 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 OR1C1Q15619 314 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 SYT16Q17RD7 645 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 MUM1Q2TAK8 710 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 ACER2Q5QJU3 275 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 LANCL3Q6ZV70 420 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 DCUN1D3Q8IWE4 304 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 DMRTC2Q8IXT2 367 aaPredicted RBP9.38□□□□□ -0.91
TPM1-225ENST00000560679 DNAAF3Q8N9W5 541 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 SLC35G2Q8TBE7 412 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 P3H4Q92791 437 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 ZUFSPQ96AP4 578 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 SLC22A18Q96BI1 424 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 CABS1Q96KC9 395 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 MIPEPQ99797 713 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 TBL1YQ9BQ87 522 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 ARNT2Q9HBZ2 717 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 DDX56Q9NY93 547 aaKnown RBP9.38□□□□□ -0.91
TPM1-225ENST00000560679 FAM53CQ9NYF3 392 aa9.38□□□□□ -0.91
TPM1-225ENST00000560679 JMJD1CQ15652 2540 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 A0A1W2PPV9 198 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 OR2A25A4D2G3 310 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 GRID2IPA4D2P6 1211 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 FAM90A27PA6NNH2 459 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 A8MUI8 341 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 HACD1B0YJ81 288 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 QSOX1O00391 747 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 OR1I1O60431 355 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 NEURL1O76050 574 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 SEC24DO94855 1032 aaPredicted RBP9.37□□□□□ -0.91
TPM1-225ENST00000560679 TOXO94900 526 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 SEC31AO94979 1220 aaKnown RBP9.37□□□□□ -0.91
TPM1-225ENST00000560679 TSPAN12O95859 305 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 EIF2S1P05198 315 aaKnown RBP9.37□□□□□ -0.91
TPM1-225ENST00000560679 HEXBP07686 556 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 RHOXF2BP0C7M4 288 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 CCR7P32248 378 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 FOXN2P32314 431 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 PTGER1P34995 402 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 CD96P40200 585 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 MARCKSL1P49006 195 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 PLOD1Q02809 727 aaPredicted RBP9.37□□□□□ -0.91
TPM1-225ENST00000560679 CCSMST1Q4G0I0 132 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 MEI1Q5TIA1 1274 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 ITPRIPL1Q6GPH6 555 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 SPINK14Q6IE38 97 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 H3F3CQ6NXT2 135 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 WDR93Q6P2C0 686 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 GALNTL5Q7Z4T8 443 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 CREG2Q8IUH2 290 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 CRLF3Q8IUI8 442 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 KLHDC8BQ8IXV7 354 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 KRT222Q8N1A0 295 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 GHDCQ8N2G8 530 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 RPRMLQ8N4K4 120 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 MMGT1Q8N4V1 131 aa9.37□□□□□ -0.91
TPM1-225ENST00000560679 CHDHQ8NE62 594 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms