RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 NTSP30990 170 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 TAS2R38P59533 333 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 TAS2R50P59544 299 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 SIM1P81133 766 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-209ENST00000560637 SLC18A2Q05940 514 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 GRB7Q14451 532 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 ABRAXAS2Q15018 415 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 ANGPT1Q15389 498 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 PAGE2Q7Z2X7 111 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 CBARPQ8N350 705 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-209ENST00000560637 PHTF2Q8N3S3 785 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 FAM47BQ8NA70 645 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 LZICQ8WZA0 190 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 MR1Q95460 341 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 RBM18Q96H35 190 aaKnown RBP5.26□□□□□ -1.57
VPS13C-209ENST00000560637 TMEM109Q9BVC6 243 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 ASPSCR1Q9BZE9 553 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 REXO4Q9GZR2 422 aaKnown RBP5.26□□□□□ -1.57
VPS13C-209ENST00000560637 UCKL1Q9NWZ5 548 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 DHCR7Q9UBM7 475 aaKnown RBP5.26□□□□□ -1.57
VPS13C-209ENST00000560637 VTI1BQ9UEU0 232 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 PISDQ9UG56 409 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 PCDHB11Q9Y5F2 797 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 SDK2Q58EX2 2172 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 A0A1B0GTW7 788 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 HMX2A2RU54 273 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 URADA6NGE7 173 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 STX16-NPEPL1H3BU86 382 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 YY2O15391 372 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 SLC22A3O75751 556 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 OR2B3O76000 313 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 KRT16P08779 473 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 UROSP10746 265 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 G6PDP11413 515 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 AOAHP28039 575 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 POU1F1P28069 291 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 HPCAL1P37235 193 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 CCNFP41002 786 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 SLC19A1P41440 591 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 MAGEA6P43360 314 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 YAP1P46937 504 aaKnown RBP5.26□□□□□ -1.57
VPS13C-209ENST00000560637 IDH3AP50213 366 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 SLC7A2P52569 658 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 PRKAA2P54646 552 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 FGL2Q14314 439 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 FRG1Q14331 258 aaKnown RBP5.26□□□□□ -1.57
VPS13C-209ENST00000560637 NAA25Q14CX7 972 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 RPE65Q16518 533 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 GPAT3Q53EU6 434 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 CPTPQ5TA50 214 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 PRAMEF17Q5VTA0 474 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 OR4F3Q6IEY1 312 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 ZCCHC8Q6NZY4 707 aaKnown RBP5.26□□□□□ -1.57
VPS13C-209ENST00000560637 LETMD1Q6P1Q0 360 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 AVL9Q8NBF6 648 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 DDHD1Q8NEL9 900 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 ATP6V1C2Q8NEY4 427 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 PRR7Q8TB68 274 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 RDH11Q8TC12 318 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 NUDT8Q8WV74 236 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 JSRP1Q96MG2 331 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-209ENST00000560637 MAP3K3Q99759 626 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 TXLNGYQ9BZA5 131 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 RERGLQ9H628 205 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 EPHX3Q9H6B9 360 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 RMND5AQ9H871 391 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 FBRSQ9HAH7 460 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 ANKHQ9HCJ1 492 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 EVA1BQ9NVM1 165 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 ALKBH4Q9NXW9 302 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 VPS29Q9UBQ0 182 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 PRKAG3Q9UGI9 489 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 GPN3Q9UHW5 284 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-209ENST00000560637 KLF15Q9UIH9 416 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 CROTQ9UKG9 612 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 ASB1Q9Y576 335 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 HEBP2Q9Y5Z4 205 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 POLEQ07864 2286 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 CACNA1AO00555 2505 aa5.26□□□□□ -1.57
VPS13C-209ENST00000560637 CKAP5Q14008 2032 aa5.25□□□□□ -1.57
VPS13C-209ENST00000560637 XIRP2A4UGR9 3374 aa5.25□□□□□ -1.57
VPS13C-209ENST00000560637 A0A0A6YYC8 382 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-209ENST00000560637 IGHV1OR15-9A0A0B4J2B8 117 aa5.25□□□□□ -1.57
VPS13C-209ENST00000560637 I3L1I5 382 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-209ENST00000560637 PSMD11O00231 422 aa5.25□□□□□ -1.57
VPS13C-209ENST00000560637 DUX1O43812 170 aa5.25□□□□□ -1.57
VPS13C-209ENST00000560637 PDYNP01213 254 aa5.25□□□□□ -1.57
VPS13C-209ENST00000560637 NDUFS1P28331 727 aa5.25□□□□□ -1.57
VPS13C-209ENST00000560637 KRT20P35900 424 aa5.25□□□□□ -1.57
VPS13C-209ENST00000560637 KIR3DL1P43629 444 aa5.25□□□□□ -1.57
VPS13C-209ENST00000560637 OR1D4P47884 311 aa5.25□□□□□ -1.57
VPS13C-209ENST00000560637 PRLHRP49683 370 aa5.25□□□□□ -1.57
VPS13C-209ENST00000560637 MTPNP58546 118 aa5.25□□□□□ -1.57
VPS13C-209ENST00000560637 ERVPABLB-1P60509 514 aa5.25□□□□□ -1.57
VPS13C-209ENST00000560637 B4GALNT1Q00973 533 aa5.25□□□□□ -1.57
VPS13C-209ENST00000560637 ALDH6A1Q02252 535 aaKnown RBP5.25□□□□□ -1.57
VPS13C-209ENST00000560637 PPP1R8Q12972 351 aaKnown RBP5.25□□□□□ -1.57
VPS13C-209ENST00000560637 EIF4EBP2Q13542 120 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-209ENST00000560637 RAPSNQ13702 412 aa5.25□□□□□ -1.57
VPS13C-209ENST00000560637 CLCA4Q14CN2 919 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms