RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 EMP3P54852 163 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 ARF3P61204 181 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 YBX1P67809 324 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 FASTKQ14296 549 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 SPARCL1Q14515 664 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 CEBPEQ15744 281 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 SYT16Q17RD7 645 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 PLAG1Q6DJT9 500 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 ITPRIPL1Q6GPH6 555 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 FBXO42Q6P3S6 717 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 CRLF3Q8IUI8 442 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 ZC3H7AQ8IWR0 971 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 TAB3Q8N5C8 712 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 TMEM178AQ8NBL3 297 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 OR2L3Q8NG85 312 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 HDAC10Q969S8 669 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 MVB12AQ96EY5 273 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 CCDC42Q96M95 316 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 TBL1YQ9BQ87 522 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 UTP23Q9BRU9 249 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 ARNT2Q9HBZ2 717 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 MKKSQ9NPJ1 570 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 ZNHIT6Q9NWK9 470 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 MKL2Q9ULH7 1088 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 RNF6Q9Y252 685 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 AAR2Q9Y312 384 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 MXRA5Q9NR99 2828 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 ARHGAP21Q5T5U3 1957 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 OR51F1A6NGY5 319 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 PRPF4O43172 522 aaKnown RBP eCLIP12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 FOXS1O43638 330 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 OR1I1O60431 355 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 NEURL1O76050 574 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 ZWINTO95229 277 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 RPN2P04844 631 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 SP1P08047 785 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 OR56A5P0C7T3 313 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 ERVK-10P10266 1014 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 CHRNB4P30926 498 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 CCR7P32248 378 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 PTGER1P34995 402 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 HSPA14Q0VDF9 509 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 MYBPHQ13203 477 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 TCEAL1Q15170 157 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 MEP1AQ16819 746 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 BTBD16Q32M84 506 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 UNC5DQ6UXZ4 953 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 LANCL3Q6ZV70 420 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 FAM57AQ8TBR7 257 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 ASB5Q8WWX0 329 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 MMABQ96EY8 250 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 MDFIQ99750 246 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 GOLPH3Q9H4A6 298 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 ZNF358Q9NW07 568 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 DNAJB12Q9NXW2 375 aaKnown RBP12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 FEZ2Q9UHY8 353 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 ST6GALNAC2Q9UJ37 374 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 SLC39A10Q9ULF5 831 aa12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 RUVBL1Q9Y265 456 aaKnown RBP12.1□□□□□ -0.47
RABGGTA-213ENST00000560127 OR2A25A4D2G3 310 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 KRT87PA6NCN2 255 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 GPC4O75487 556 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 ZNF24P17028 368 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 TPH1P17752 444 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 FOXN2P32314 431 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 ADAM8P78325 824 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 MAT1AQ00266 395 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 HKDC1Q2TB90 917 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 ANKRD20A2Q5SQ80 823 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 ANKRD20A1Q5TYW2 823 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 ANKRD20A3Q5VUR7 823 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 SLC25A25Q6KCM7 469 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 Q71RC1 249 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 CPEB2Q7Z5Q1 589 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 CD163Q86VB7 1156 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 CCDC71Q8IV32 467 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 SHISA5Q8N114 240 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 ARHGEF39Q8N4T4 335 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 SPC24Q8NBT2 197 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 FAM98AQ8NCA5 519 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 ACRBPQ8NEB7 543 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 OR2A1Q8NGT9 310 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 LKAAEAR1Q8TD35 194 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 SMR3AQ99954 134 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 ZFYVE21Q9BQ24 234 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 VN1R1Q9GZP7 353 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 KCNK13Q9HB14 408 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 KCNJ16Q9NPI9 418 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 GNPTGQ9UJJ9 305 aa12.09□□□□□ -0.47
RABGGTA-213ENST00000560127 HIVEP2P31629 2446 aa12.08□□□□□ -0.48
RABGGTA-213ENST00000560127 hCG_1818297A0A087WSY0 165 aa12.08□□□□□ -0.48
RABGGTA-213ENST00000560127 A0A0A6YYC8 382 aaPredicted RBP12.08□□□□□ -0.48
RABGGTA-213ENST00000560127 A0A1W2PPV9 198 aa12.08□□□□□ -0.48
RABGGTA-213ENST00000560127 GABRR3A8MPY1 467 aa12.08□□□□□ -0.48
RABGGTA-213ENST00000560127 H7C0C1 242 aa12.08□□□□□ -0.48
RABGGTA-213ENST00000560127 I3L1I5 382 aaPredicted RBP12.08□□□□□ -0.48
RABGGTA-213ENST00000560127 TPOP07202 933 aa12.08□□□□□ -0.48
RABGGTA-213ENST00000560127 ANXA5P08758 320 aa12.08□□□□□ -0.48
RABGGTA-213ENST00000560127 COMTP21964 271 aa12.08□□□□□ -0.48
RABGGTA-213ENST00000560127 PSMA3P25788 255 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms