RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 METTL12A8MUP2 240 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 C1orf105O95561 183 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 BCKDHAP12694 445 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 HTR1EP28566 365 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 PDHA2P29803 388 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 CNR2P34972 360 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 DGKQP52824 942 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 PTGR1Q14914 329 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 RABL3Q5HYI8 236 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 GRHL2Q6ISB3 625 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 ARMCX6Q7L4S7 300 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 LPCAT2Q7L5N7 544 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 C11orf74Q86VG3 221 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 PROSER1Q86XN7 944 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 OR8J3Q8NGG0 315 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 CGREF1Q99674 301 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 MYOCQ99972 504 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 C1QTNF7Q9BXJ2 289 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 DPEP2Q9H4A9 486 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 FZD3Q9NPG1 666 aa17.2■□□□□ 0.34
SNX1-208ENST00000559844 CNOT11Q9UKZ1 510 aaKnown RBP17.2■□□□□ 0.34
SNX1-208ENST00000559844 TNRC6BQ9UPQ9 1833 aaKnown RBP17.19■□□□□ 0.34
SNX1-208ENST00000559844 MAGEA13PA6NCF6 341 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 PRAMEF4O60810 478 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 IMPA1P29218 277 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 PNLIPRP1P54315 467 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 CLDN8P56748 225 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 PRAMEF9Q5VWM5 478 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 SUSD1Q6UWL2 747 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 CEP68Q76N32 757 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 OR2L2Q8NH16 312 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 FOXJ1Q92949 421 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 MED8Q96G25 268 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 DUSP15Q9H1R2 295 aaPredicted RBP17.19■□□□□ 0.34
SNX1-208ENST00000559844 CCM2LQ9NUG4 571 aaPredicted RBP17.19■□□□□ 0.34
SNX1-208ENST00000559844 SLAMF8Q9P0V8 285 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 GMPR2Q9P2T1 348 aaKnown RBP17.19■□□□□ 0.34
SNX1-208ENST00000559844 AP3M1Q9Y2T2 418 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 CACNA1HO95180 2353 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 KRT87PA6NCN2 255 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 ZNF839A8K0R7 811 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 ARPC2O15144 300 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 POP7O75817 140 aaKnown RBP17.19■□□□□ 0.34
SNX1-208ENST00000559844 SLC16A8O95907 504 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 HSD3B1P14060 373 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 ZNF8P17098 575 aaPredicted RBP17.19■□□□□ 0.34
SNX1-208ENST00000559844 HSD3B2P26439 372 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 HSPA13P48723 471 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 NEK2P51955 445 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 MED21Q13503 144 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 AGERQ15109 404 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 MAPKAPK3Q16644 382 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 WSCD2Q2TBF2 565 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 FAM174BQ3ZCQ3 159 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 TICAM1Q8IUC6 712 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 SLCO4A1Q96BD0 722 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 COX14Q96I36 57 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 METTL2AQ96IZ6 378 aaKnown RBP17.19■□□□□ 0.34
SNX1-208ENST00000559844 Q9H521 79 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 GULP1Q9UBP9 304 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 EGFL7Q9UHF1 273 aa17.19■□□□□ 0.34
SNX1-208ENST00000559844 MGAT4DA6NG13 374 aa17.18■□□□□ 0.34
SNX1-208ENST00000559844 H0YIV9 168 aa17.18■□□□□ 0.34
SNX1-208ENST00000559844 HNRNPRO43390 633 aaKnown RBP17.18■□□□□ 0.34
SNX1-208ENST00000559844 PGRP06401 933 aa17.18■□□□□ 0.34
SNX1-208ENST00000559844 GPIP06744 558 aa17.18■□□□□ 0.34
SNX1-208ENST00000559844 IL10P22301 178 aa17.18■□□□□ 0.34
SNX1-208ENST00000559844 PSMA4P25789 261 aaKnown RBP17.18■□□□□ 0.34
SNX1-208ENST00000559844 DOC2AQ14183 400 aa17.18■□□□□ 0.34
SNX1-208ENST00000559844 IRF4Q15306 451 aa17.18■□□□□ 0.34
SNX1-208ENST00000559844 FXNQ16595 210 aa17.18■□□□□ 0.34
SNX1-208ENST00000559844 CCSMST1Q4G0I0 132 aa17.18■□□□□ 0.34
SNX1-208ENST00000559844 PMS2CLQ68D20 193 aa17.18■□□□□ 0.34
SNX1-208ENST00000559844 CAPN13Q6MZZ7 669 aaPredicted RBP17.18■□□□□ 0.34
SNX1-208ENST00000559844 SPPL2CQ8IUH8 684 aa17.18■□□□□ 0.34
SNX1-208ENST00000559844 ASB12Q8WXK4 309 aa17.18■□□□□ 0.34
SNX1-208ENST00000559844 SH3GL1Q99961 368 aa17.18■□□□□ 0.34
SNX1-208ENST00000559844 VPS13AQ96RL7 3174 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 USP34Q70CQ2 3546 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 A0A1W2PPC4 97 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 DHRS12A0PJE2 317 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 E7EQ34 232 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 PCCBP05166 539 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 UMPSP11172 480 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 AMD1P17707 334 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 HNRNPA2B1P22626 353 aaKnown RBP17.17■□□□□ 0.34
SNX1-208ENST00000559844 RPA4Q13156 261 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 PLK5Q496M5 336 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 SPANXN4Q5MJ08 99 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 PNCKQ6P2M8 343 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 UNC5DQ6UXZ4 953 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 IFNEQ86WN2 208 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 ZNF547Q8IVP9 402 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 TP53I13Q8NBR0 393 aaPredicted RBP17.17■□□□□ 0.34
SNX1-208ENST00000559844 WDR20Q8TBZ3 569 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 CANT1Q8WVQ1 401 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 FCRL1Q96LA6 429 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 TMEM74Q96NL1 305 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 RMND5AQ9H871 391 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 MBNL1Q9NR56 388 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms