RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 CPPED1Q9BRF8 314 aaPredicted RBP10.26□□□□□ -0.77
CUX1-217ENST00000558836 OR51B5Q9H339 312 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 DYRK4Q9NR20 520 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 ASIC5Q9NY37 505 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 ALPK3Q96L96 1907 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 GABRR3A8MPY1 467 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 C5orf67F2Z3F1 127 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 LILRB5O75023 590 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 NFATC1O95644 943 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 PCCBP05166 539 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 ANXA4P09525 319 aaPredicted RBP10.26□□□□□ -0.77
CUX1-217ENST00000558836 NPPBP16860 134 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 ENGP17813 658 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 FSHRP23945 695 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 ITGB7P26010 798 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 AQP1P29972 269 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 SOX9P48436 509 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 ARSFP54793 590 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 WNT3P56703 355 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 IRAK1BP1Q5VVH5 260 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 SPESP1Q6UW49 350 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 XKR5Q6UX68 686 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 NEK10Q6ZWH5 1172 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 CHCHD4Q8N4Q1 142 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 OR4K1Q8NGD4 311 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 PHOSPHO2Q8TCD6 241 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 SUSD6Q92537 303 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 DGCR14Q96DF8 476 aaKnown RBP10.26□□□□□ -0.77
CUX1-217ENST00000558836 MUS81Q96NY9 551 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 PLA2G2FQ9BZM2 168 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 RMND5AQ9H871 391 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 GORASP2Q9H8Y8 452 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 CLK4Q9HAZ1 481 aaKnown RBP10.26□□□□□ -0.77
CUX1-217ENST00000558836 SH3BP4Q9P0V3 963 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 SLC23A2Q9UGH3 650 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 PCDHGA11Q9Y5H2 935 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 KCNE2Q9Y6J6 123 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 LAMA1P25391 3075 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 A0A096LPI6 279 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 EDDM13A0A1B0GTR0 161 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 H0Y858 1186 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 CLIC1O00299 241 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 DEAF1O75398 565 aaPredicted RBP10.26□□□□□ -0.77
CUX1-217ENST00000558836 ERN1O75460 977 aaKnown RBP10.26□□□□□ -0.77
CUX1-217ENST00000558836 ELK4P28324 431 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 P2RY2P41231 377 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 RAE1P78406 368 aaKnown RBP10.26□□□□□ -0.77
CUX1-217ENST00000558836 MC1RQ01726 317 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 FOXD4Q12950 439 aaPredicted RBP10.26□□□□□ -0.77
CUX1-217ENST00000558836 SMU1Q2TAY7 513 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 EGFLAMQ63HQ2 1017 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 ANGPTL8Q6UXH0 198 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 PRR23BQ6ZRT6 265 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 NLRP8Q86W28 1048 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 RASGRP3Q8IV61 690 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 TERB1Q8NA31 727 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 OR5AR1Q8NGP9 310 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 MAL2Q969L2 176 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 RPP25Q9BUL9 199 aaKnown RBP10.26□□□□□ -0.77
CUX1-217ENST00000558836 SORBS1Q9BX66 1292 aaKnown RBP10.26□□□□□ -0.77
CUX1-217ENST00000558836 UGT2B28Q9BY64 529 aa10.26□□□□□ -0.77
CUX1-217ENST00000558836 YBX2Q9Y2T7 364 aaKnown RBP10.26□□□□□ -0.77
CUX1-217ENST00000558836 HEMK1Q9Y5R4 338 aaPredicted RBP10.26□□□□□ -0.77
CUX1-217ENST00000558836 IGLON5A6NGN9 336 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 G3V2T6 193 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 PCDH8O95206 1070 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 MAPK1P28482 360 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 PCSK6P29122 969 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 POLR2IP36954 125 aaKnown RBP10.25□□□□□ -0.77
CUX1-217ENST00000558836 GZMMP51124 257 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 SLBPQ14493 270 aaKnown RBP eCLIP10.25□□□□□ -0.77
CUX1-217ENST00000558836 C1QTNF12Q5T7M4 302 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 RNF165Q6ZSG1 346 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 ERN2Q76MJ5 926 aaKnown RBP10.25□□□□□ -0.77
CUX1-217ENST00000558836 VTCN1Q7Z7D3 282 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 GALNT15Q8N3T1 639 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 PACRGLQ8N7B6 248 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 OR56A3Q8NH54 315 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 WFIKKN2Q8TEU8 576 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 ATL1Q8WXF7 558 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 TESCQ96BS2 214 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 BARD1Q99728 777 aaKnown RBP10.25□□□□□ -0.77
CUX1-217ENST00000558836 SH3GL1Q99961 368 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 KXD1Q9BQD3 176 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 TMEM245Q9H330 911 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 PRSS16Q9NQE7 514 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 DCAF13Q9NV06 445 aaKnown RBP10.25□□□□□ -0.77
CUX1-217ENST00000558836 EXD2Q9NVH0 621 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 SPATA6Q9NWH7 488 aaPredicted RBP10.25□□□□□ -0.77
CUX1-217ENST00000558836 ASF1AQ9Y294 204 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 DGKBQ9Y6T7 804 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 SMIM31A0A1B0GVY4 71 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 AHCYL1O43865 530 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 SCN2BO60939 215 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 E2F6O75461 281 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 PRPS1L1P21108 318 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 MYF6P23409 242 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 NR1H2P55055 460 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 LRIF1Q5T3J3 769 aa10.25□□□□□ -0.77
CUX1-217ENST00000558836 GRHL2Q6ISB3 625 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms