RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 MRPS22P82650 360 aaKnown RBP12.49□□□□□ -0.41
SMAD3-207ENST00000558763 SRSF5Q13243 272 aaKnown RBP12.49□□□□□ -0.41
SMAD3-207ENST00000558763 NFYCQ13952 458 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 FAM174BQ3ZCQ3 159 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 PYCR3Q53H96 274 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 SPANXN4Q5MJ08 99 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 TPRG1LQ5T0D9 272 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 DUS1LQ6P1R4 473 aaKnown RBP12.49□□□□□ -0.41
SMAD3-207ENST00000558763 DHDDSQ86SQ9 333 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 TMPRSS11BQ86T26 416 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 RIMKLAQ8IXN7 391 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 TMEM74Q96NL1 305 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 MTERF1Q99551 399 aaKnown RBP12.49□□□□□ -0.41
SMAD3-207ENST00000558763 FGF22Q9HCT0 170 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 GID8Q9NWU2 228 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 GEMIN8Q9NWZ8 242 aaKnown RBP12.49□□□□□ -0.41
SMAD3-207ENST00000558763 PPT2Q9UMR5 302 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 TMED5Q9Y3A6 229 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 LRRC42Q9Y546 428 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 KLHL33A6NCF5 533 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 MAGEB17A8MXT2 336 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 H0Y8X5 98 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 CLGNO14967 610 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 GPR37L1O60883 481 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 ATP6V1B2P21281 511 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 HNRNPA2B1P22626 353 aaKnown RBP12.49□□□□□ -0.41
SMAD3-207ENST00000558763 CLDN8P56748 225 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 TRAP1Q12931 704 aaKnown RBP12.49□□□□□ -0.41
SMAD3-207ENST00000558763 FXNQ16595 210 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 CACHD1Q5VU97 1274 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 ATG9BQ674R7 924 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 ARMCX6Q7L4S7 300 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 CHST15Q7LFX5 561 aaPredicted RBP12.49□□□□□ -0.41
SMAD3-207ENST00000558763 MSRB3Q8IXL7 192 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 LAS2Q8IYD9 372 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 TMEFF1Q8IYR6 380 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 GLB1L3Q8NCI6 653 aaPredicted RBP12.49□□□□□ -0.41
SMAD3-207ENST00000558763 HUS1BQ8NHY5 278 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 SLC13A3Q8WWT9 602 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 GTF2H4Q92759 462 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 RAD51AP1Q96B01 352 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 EGLN2Q96KS0 407 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 APOLD1Q96LR9 279 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 HSPA12BQ96MM6 686 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 ZNF570Q96NI8 536 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 EHD1Q9H4M9 534 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 RMI1Q9H9A7 625 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 BRF2Q9HAW0 419 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 CCDC177Q9NQR7 707 aaPredicted RBP12.49□□□□□ -0.41
SMAD3-207ENST00000558763 SUFUQ9UMX1 484 aa12.49□□□□□ -0.41
SMAD3-207ENST00000558763 KMT2EQ8IZD2 1858 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 FRYLO94915 3013 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 NUP214P35658 2090 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-207ENST00000558763 LAMA1P25391 3075 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 TRBV5-3A0A0A0MS03 114 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 CCDC163A0A0D9SF12 145 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 PRSS51A0A1B0GVH4 220 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 A0A1W2PPV9 198 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 TCRBV3S1A0A5B6 114 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 NPPAP01160 153 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 PRPS2P11908 318 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 HSD3B1P14060 373 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 HOXB9P17482 250 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-207ENST00000558763 KELP23276 732 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 HSD3B2P26439 372 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 CCR5P51681 352 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 CLCNKAP51800 687 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 RAE1P78406 368 aaKnown RBP12.48□□□□□ -0.41
SMAD3-207ENST00000558763 SELPLGQ14242 412 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 CYP2A13Q16696 494 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 NANOGP8Q6NSW7 305 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 NOXRED1Q6NXP6 359 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 WDR5BQ86VZ2 330 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 DNAJB14Q8TBM8 379 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 SLC5A11Q8WWX8 675 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 INSM2Q96T92 566 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-207ENST00000558763 DPY30Q9C005 99 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 NANOGQ9H9S0 305 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 SERHLQ9NQF3 203 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 VPS29Q9UBQ0 182 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 ACSL5Q9ULC5 683 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 PNMA8BQ9ULN7 279 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-207ENST00000558763 PCDHGA11Q9Y5H2 935 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 SLCO1B1Q9Y6L6 691 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 CUL9Q8IWT3 2517 aa12.48□□□□□ -0.41
SMAD3-207ENST00000558763 PIPSLA2A3N6 862 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 CASQ2O14958 399 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-207ENST00000558763 B3GALT4O96024 378 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 PGRP06401 933 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 HOXC4P09017 264 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-207ENST00000558763 C1GALT1C1LP0DN25 315 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 MAOBP27338 520 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 GSK3BP49841 420 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 KIAA1024LP59773 190 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 SLBPQ14493 270 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMAD3-207ENST00000558763 ARHGAP19Q14CB8 494 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 SPATS1Q496A3 300 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 PRAMEF14Q5SWL7 426 aa12.47□□□□□ -0.41
SMAD3-207ENST00000558763 PRAMEF13Q5VWM6 474 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms