RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 LIPGQ9Y5X9 500 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 ALG6Q9Y672 507 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 FAM169AQ9Y6X4 670 aa11.16□□□□□ -0.62
SMAD3-206ENST00000558739 CFAP99D6REC4 459 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 SLC16A5O15375 505 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 FOXS1O43638 330 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 AGTP01019 485 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 NID1P14543 1247 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 CDK11BP21127 795 aaKnown RBP11.15□□□□□ -0.62
SMAD3-206ENST00000558739 ACVR2AP27037 513 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 TPP2P29144 1249 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-206ENST00000558739 ZNF140P52738 457 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-206ENST00000558739 ITGA8P53708 1063 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 GPR85P60893 370 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 MESDQ14696 234 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 ARHGAP11AQ6P4F7 1023 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 SERPINA9Q86WD7 417 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 VRK3Q8IV63 474 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 SULF2Q8IWU5 870 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 PIANPQ8IYJ0 282 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 ARHGEF39Q8N4T4 335 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 RELL2Q8NC24 303 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-206ENST00000558739 RNF157Q96PX1 679 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 GORASP1Q9BQQ3 440 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 CDCP1Q9H5V8 836 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 VPS37BQ9H9H4 285 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 MKKSQ9NPJ1 570 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-206ENST00000558739 LUC7LQ9NQ29 371 aaKnown RBP11.15□□□□□ -0.62
SMAD3-206ENST00000558739 BEX4Q9NWD9 120 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-206ENST00000558739 TRMT1Q9NXH9 659 aaKnown RBP11.15□□□□□ -0.62
SMAD3-206ENST00000558739 ZDHHC3Q9NYG2 299 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 IP6K2Q9UHH9 426 aa11.15□□□□□ -0.62
SMAD3-206ENST00000558739 EML6Q6ZMW3 1958 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 SLC5A10A0PJK1 596 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 LRRC53A6NM62 1247 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 LGALS16A8MUM7 142 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 H0YGG7 62 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 P2RX6O15547 441 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 SRPX2O60687 465 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-206ENST00000558739 S1PR4O95977 384 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 STATHP02808 62 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 MYBL1P10243 752 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 ERVK-10P10266 1014 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 GZMAP12544 262 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 ITGALP20701 1170 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 ACRV1P26436 265 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 ARF3P61204 181 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-206ENST00000558739 PDK2Q15119 407 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 TAF1AQ15573 450 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-206ENST00000558739 SLC25A35Q3KQZ1 300 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 MINDY4Q4G0A6 757 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 GXYLT1Q4G148 440 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 MFSD4BQ5TF39 518 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 SLC9A4Q6AI14 798 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 PPP1R2P3Q6NXS1 205 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 ZNF585AQ6P3V2 769 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 SNX20Q7Z614 316 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 ANKRD37Q7Z713 158 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 ULK2Q8IYT8 1036 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 FAM222BQ8WU58 562 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 ZNF592Q92610 1267 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 ULK4Q96C45 1275 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 CYTH2Q99418 400 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 SH3GL2Q99962 352 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 ZFYVE21Q9BQ24 234 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 PLCD4Q9BRC7 762 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 LMBRD1Q9NUN5 540 aa11.14□□□□□ -0.63
SMAD3-206ENST00000558739 INTS7Q9NVH2 962 aaKnown RBP11.14□□□□□ -0.63
SMAD3-206ENST00000558739 SAE1Q9UBE0 346 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-206ENST00000558739 TRBV5-4A0A0C4DH59 114 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 PINLYPA6NC86 204 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 ARHGEF33A8MVX0 844 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 HAX1O00165 279 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 LIN7AO14910 233 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-206ENST00000558739 F12P00748 615 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-206ENST00000558739 EPOP01588 193 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 MC4RP32245 332 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 DYNLT1P63172 113 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 UBXN1Q04323 297 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 TYRO3Q06418 890 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 DAZAP2Q15038 168 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-206ENST00000558739 PDK1Q15118 436 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 DBN1Q16643 649 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 CCSMST1Q4G0I0 132 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 KAZNQ674X7 775 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 ZNF449Q6P9G9 518 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 B3GNT6Q6ZMB0 384 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 PRSS41Q7RTY9 318 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 P3H2Q8IVL5 708 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 SLC5A8Q8N695 610 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 CSNK1A1LQ8N752 337 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 HORMAD2Q8N7B1 307 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 OR2L3Q8NG85 312 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 OR2L8Q8NGY9 312 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 CFAP61Q8NHU2 1237 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 METTL21AQ8WXB1 218 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 DNAJC1Q96KC8 554 aaKnown RBP11.13□□□□□ -0.63
SMAD3-206ENST00000558739 ISCUQ9H1K1 167 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 MMP25Q9NPA2 562 aa11.13□□□□□ -0.63
SMAD3-206ENST00000558739 IMPACTQ9P2X3 320 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms