RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 TSACCQ96A04 125 aaPredicted RBP2.84□□□□□ -1.95
SPG11-206ENST00000558093 TSPAN18Q96SJ8 248 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 Q9H8V8 135 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 TBC1D7Q9P0N9 293 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.84□□□□□ -1.95
SPG11-206ENST00000558093 PA2G4Q9UQ80 394 aaKnown RBP2.84□□□□□ -1.95
SPG11-206ENST00000558093 SELENOKQ9Y6D0 94 aa2.84□□□□□ -1.95
SPG11-206ENST00000558093 IGSF1Q8N6C5 1336 aa2.84□□□□□ -1.96
SPG11-206ENST00000558093 PASKQ96RG2 1323 aa2.84□□□□□ -1.96
SPG11-206ENST00000558093 PCNX3Q9H6A9 2034 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 ASB14A6NK59 587 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 SOCS3O14543 225 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 AP5Z1O43299 807 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 DIAPH2O60879 1101 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 MYBL1P10243 752 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 AKR1B1P15121 316 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 EPCAMP16422 314 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 CYP11B2P19099 503 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 CD27P26842 260 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 SHC1P29353 583 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 RAB28P51157 221 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 CSNK2BP67870 215 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 NFATC2Q13469 925 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 KCTD2Q14681 263 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 NONOQ15233 471 aaKnown RBP eCLIP2.83□□□□□ -1.96
SPG11-206ENST00000558093 ZNF239Q16600 458 aaKnown RBP2.83□□□□□ -1.96
SPG11-206ENST00000558093 NAA16Q6N069 864 aaPredicted RBP2.83□□□□□ -1.96
SPG11-206ENST00000558093 LEKR1Q6ZMV7 388 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 FRRS1Q6ZNA5 592 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 GPRIN3Q6ZVF9 776 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 TLK2Q86UE8 772 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 CATSPERDQ86XM0 798 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 LMNTD2Q8IXW0 634 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 RASGEF1AQ8N9B8 481 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 ROBO4Q8WZ75 1007 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 GTF3AQ92664 365 aaKnown RBP2.83□□□□□ -1.96
SPG11-206ENST00000558093 HDAC11Q96DB2 347 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 PRICKLE1Q96MT3 831 aaPredicted RBP2.83□□□□□ -1.96
SPG11-206ENST00000558093 MUS81Q96NY9 551 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 AGAP4Q96P64 663 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 FEVQ99581 238 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 MAP3K3Q99759 626 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 SLF1Q9BQI6 1058 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 SLC2A11Q9BYW1 496 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 GPR88Q9GZN0 384 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 RSPH9Q9H1X1 276 aaPredicted RBP2.83□□□□□ -1.96
SPG11-206ENST00000558093 PANK3Q9H999 370 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 RPS10P5Q9NQ39 176 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 GSN-AS1Q9NRJ2 163 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 NDE1Q9NXR1 346 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 KLK13Q9UKR3 277 aa2.83□□□□□ -1.96
SPG11-206ENST00000558093 TDRD15B5MCY1 1934 aaKnown RBP2.83□□□□□ -1.96
SPG11-206ENST00000558093 TRBV4-1A0A0J9YWV2 114 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 TRBV5-5A0A0J9YX44 114 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 MPTX1A8MV57 137 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 PTGESO14684 152 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 KRT33AO76009 404 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 SLCO2B1O94956 709 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 CELF2O95319 508 aaKnown RBP2.82□□□□□ -1.96
SPG11-206ENST00000558093 HPRP00739 348 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 CSN3P07498 182 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 VDRP11473 427 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 CPT2P23786 658 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 ELAVL4P26378 380 aaKnown RBP2.82□□□□□ -1.96
SPG11-206ENST00000558093 OXTRP30559 389 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 POLR2LP62875 67 aaKnown RBP2.82□□□□□ -1.96
SPG11-206ENST00000558093 ACSM1Q08AH1 577 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 MTF1Q14872 753 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 OPCMLQ14982 345 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 PTPN14Q15678 1187 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 TAB1Q15750 504 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 EXT1Q16394 746 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 GPR33Q49SQ1 333 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 TCTEX1D4Q5JR98 221 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 LCE3CQ5T5A8 94 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 SPINK14Q6IE38 97 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 SLC24A5Q71RS6 500 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 PLPPR4Q7Z2D5 763 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 SPAG16Q8N0X2 631 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 FAM89BQ8N5H3 189 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 MIPOL1Q8TD10 442 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 RASL10AQ92737 203 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 SLC45A3Q96JT2 553 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 LINC00615Q96LM1 132 aaPredicted RBP2.82□□□□□ -1.96
SPG11-206ENST00000558093 TDRD1Q9BXT4 1180 aaKnown RBP2.82□□□□□ -1.96
SPG11-206ENST00000558093 HOXD1Q9GZZ0 328 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 XAB2Q9HCS7 855 aaKnown RBP2.82□□□□□ -1.96
SPG11-206ENST00000558093 SLC7A10Q9NS82 523 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 LNPEPQ9UIQ6 1025 aa2.82□□□□□ -1.96
SPG11-206ENST00000558093 ZNF318Q5VUA4 2279 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 IGHV3OR16-10A0A075B7F0 116 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 TRAV24A0A0B4J272 114 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 CASTOR2A6NHX0 329 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 PI4K2BG5E9Z4 385 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 TFECO14948 347 aaPredicted RBP2.81□□□□□ -1.96
SPG11-206ENST00000558093 SPRY1O43609 319 aaPredicted RBP2.81□□□□□ -1.96
SPG11-206ENST00000558093 GGPS1O95749 300 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 GSRP00390 522 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 THEGLP0DJG4 465 aa2.81□□□□□ -1.96
SPG11-206ENST00000558093 GP1BBP13224 206 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms