RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 ATG10Q9H0Y0 220 aa7.99□□□□□ -1.13
PSEN1-223ENST00000557511 CDC42EP4Q9H3Q1 356 aaKnown RBP7.99□□□□□ -1.13
PSEN1-223ENST00000557511 PRORYQ9H606 182 aa7.99□□□□□ -1.13
PSEN1-223ENST00000557511 ACSS3Q9H6R3 686 aa7.99□□□□□ -1.13
PSEN1-223ENST00000557511 CNOT10Q9H9A5 744 aaKnown RBP7.99□□□□□ -1.13
PSEN1-223ENST00000557511 NMRAL1Q9HBL8 299 aa7.99□□□□□ -1.13
PSEN1-223ENST00000557511 FAM60AQ9NP50 221 aa7.99□□□□□ -1.13
PSEN1-223ENST00000557511 SMYD2Q9NRG4 433 aa7.99□□□□□ -1.13
PSEN1-223ENST00000557511 TMEM184CQ9NVA4 438 aa7.99□□□□□ -1.13
PSEN1-223ENST00000557511 NINJ2Q9NZG7 142 aa7.99□□□□□ -1.13
PSEN1-223ENST00000557511 STOX2Q9P2F5 926 aaPredicted RBP7.99□□□□□ -1.13
PSEN1-223ENST00000557511 IFT80Q9P2H3 777 aaPredicted RBP7.99□□□□□ -1.13
PSEN1-223ENST00000557511 ADAMTS6Q9UKP5 1117 aa7.99□□□□□ -1.13
PSEN1-223ENST00000557511 NFU1Q9UMS0 254 aa7.99□□□□□ -1.13
PSEN1-223ENST00000557511 FARSAQ9Y285 508 aaKnown RBP7.99□□□□□ -1.13
PSEN1-223ENST00000557511 KLHL20Q9Y2M5 609 aa7.99□□□□□ -1.13
PSEN1-223ENST00000557511 MTO1Q9Y2Z2 717 aaKnown RBP7.99□□□□□ -1.13
PSEN1-223ENST00000557511 URB1O60287 2271 aaKnown RBP7.99□□□□□ -1.13
PSEN1-223ENST00000557511 ACACAQ13085 2346 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 PIKFYVEQ9Y2I7 2098 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 A0A087X1B8 175 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 EXOC1LA0A1B0GW35 172 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 A0A1W2PPV9 198 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 KRT87PA6NCN2 255 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 NPEPPSL1A6NEC2 478 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 CXorf49A8MYA2 514 aaPredicted RBP7.98□□□□□ -1.13
PSEN1-223ENST00000557511 POC1B-GALNT4F8VUJ3 575 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 CDK2AP1O14519 115 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 PHGDHO43175 533 aaKnown RBP7.98□□□□□ -1.13
PSEN1-223ENST00000557511 PRICKLE3O43900 615 aaPredicted RBP7.98□□□□□ -1.13
PSEN1-223ENST00000557511 H2AFYO75367 372 aaKnown RBP7.98□□□□□ -1.13
PSEN1-223ENST00000557511 PIAS1O75925 651 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 TIAF1O95411 115 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 RAB40ALP0C0E4 278 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 PRKAR1AP10644 381 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 SFTPCP11686 197 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 EZRP15311 586 aaKnown RBP7.98□□□□□ -1.13
PSEN1-223ENST00000557511 ITGAXP20702 1163 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 CNTFP26441 200 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 TYK2P29597 1187 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 SERPINB8P50452 374 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 PMS2P54278 862 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 CDKL1Q00532 357 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 TIAL1Q01085 375 aaKnown RBP eCLIP7.98□□□□□ -1.13
PSEN1-223ENST00000557511 CSHL1Q14406 222 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 ZNF460Q14592 562 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 ZIC1Q15915 447 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 FAM83EQ2M2I3 478 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 MUM1Q2TAK8 710 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 WASHC2DQ5SRD0 308 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 MROH9Q5TGP6 573 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 MLIPQ5VWP3 458 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 FCRL6Q6DN72 434 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 RHBDD2Q6NTF9 364 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 LCTLQ6UWM7 567 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 TTLL10Q6ZVT0 673 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 GPSM1Q86YR5 675 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 DSELQ8IZU8 1212 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 FLVCR1-AS1Q8TAF5 88 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 STAG3L4Q8TBR4 150 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 CT55Q8WUE5 264 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 STARD8Q92502 1023 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 VPS50Q96JG6 964 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 CABS1Q96KC9 395 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 PLCD4Q9BRC7 762 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 DHRS4Q9BTZ2 278 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 CAPS2Q9BXY5 557 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 TWSG1Q9GZX9 223 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 SPRTNQ9H040 489 aaPredicted RBP7.98□□□□□ -1.13
PSEN1-223ENST00000557511 CAB39LQ9H9S4 337 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 CUTCQ9NTM9 273 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 ZNF358Q9NW07 568 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 WWOXQ9NZC7 414 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 CD274Q9NZQ7 290 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 RNF112Q9ULX5 631 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 G3BP2Q9UN86 482 aaKnown RBP7.98□□□□□ -1.13
PSEN1-223ENST00000557511 CDC14AQ9UNH5 594 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 ACOT9Q9Y305 439 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 OARD1Q9Y530 152 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 KLK4Q9Y5K2 254 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 KCNE2Q9Y6J6 123 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 MAP1BP46821 2468 aaKnown RBP7.98□□□□□ -1.13
PSEN1-223ENST00000557511 BPTFQ12830 3046 aa7.98□□□□□ -1.13
PSEN1-223ENST00000557511 APC2O95996 2303 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 A0A1B0GX78 115 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 OR2A25A4D2G3 310 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 NCF1BA6NI72 391 aaPredicted RBP7.97□□□□□ -1.13
PSEN1-223ENST00000557511 SYCE1LA8MT33 242 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 NCF1CA8MVU1 366 aaPredicted RBP7.97□□□□□ -1.13
PSEN1-223ENST00000557511 H7BY64 318 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 CDC7O00311 574 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 CREG1O75629 220 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 TSPAN12O95859 305 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 RECKO95980 971 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 ITGB2P05107 769 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 LTA4HP09960 611 aaKnown RBP7.97□□□□□ -1.13
PSEN1-223ENST00000557511 NCF1P14598 390 aaPredicted RBP7.97□□□□□ -1.13
PSEN1-223ENST00000557511 CXCR2P25025 360 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 PTPN4P29074 926 aa7.97□□□□□ -1.13
PSEN1-223ENST00000557511 SLC26A3P40879 764 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms