RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 TTC39CQ8N584 583 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 OR11H4Q8NGC9 324 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 MIPOL1Q8TD10 442 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 CCDC107Q8WV48 283 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 NECTIN4Q96NY8 510 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 PPANQ9NQ55 473 aaKnown RBP3.41□□□□□ -1.86
VRK1-207ENST00000557352 RARRES3Q9UL19 164 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 ZNF148Q9UQR1 794 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 ACEP12821 1306 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 TTC21BQ7Z4L5 1316 aa3.41□□□□□ -1.86
VRK1-207ENST00000557352 KDRP35968 1356 aa3.4□□□□□ -1.86
VRK1-207ENST00000557352 MSH6P52701 1360 aa3.4□□□□□ -1.86
VRK1-207ENST00000557352 TMEM94Q12767 1356 aa3.4□□□□□ -1.86
VRK1-207ENST00000557352 ROBO1Q9Y6N7 1651 aa3.4□□□□□ -1.86
VRK1-207ENST00000557352 A0A1W2PR80 420 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 PGPEP1LA6NFU8 196 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 PAPSS1O43252 624 aaPredicted RBP3.4□□□□□ -1.87
VRK1-207ENST00000557352 PRAMEF11O60813 436 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 GLRA3O75311 464 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 CDK2AP2O75956 126 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 DDHD2O94830 711 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 KRTAP1-4P0C5Y4 121 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 HSPA8P11142 646 aaKnown RBP3.4□□□□□ -1.87
VRK1-207ENST00000557352 KRTAP10-8P60410 259 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 GCNT1Q02742 428 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 ELFN2Q5R3F8 820 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 C17orf47Q8NEP4 570 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 NUP37Q8NFH4 326 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 OR13C3Q8NGS6 347 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 OR6S1Q8NH40 331 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 OR1L3Q8NH93 324 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 MAPK15Q8TD08 544 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 SAT2Q96F10 170 aaPredicted RBP3.4□□□□□ -1.87
VRK1-207ENST00000557352 CFAP53Q96M91 514 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 RAD9AQ99638 391 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.4□□□□□ -1.87
VRK1-207ENST00000557352 THAP2Q9H0W7 228 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 PNNQ9H307 717 aaKnown RBP3.4□□□□□ -1.87
VRK1-207ENST00000557352 SMARCAD1Q9H4L7 1026 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 EIF2B3Q9NR50 452 aaKnown RBP3.4□□□□□ -1.87
VRK1-207ENST00000557352 SERINC1Q9NRX5 453 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 TEX10Q9NXF1 929 aaPredicted RBP3.4□□□□□ -1.87
VRK1-207ENST00000557352 NME7Q9Y5B8 376 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 KDM3BQ7LBC6 1761 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 PCDH11YQ9BZA8 1340 aa3.4□□□□□ -1.87
VRK1-207ENST00000557352 FLT4P35916 1363 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 PHLPP1O60346 1717 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 SHANK3Q9BYB0 1731 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 TNS3Q68CZ2 1445 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 COL14A1Q05707 1796 aaKnown RBP3.39□□□□□ -1.87
VRK1-207ENST00000557352 ANKUB1A6NFN9 424 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 ENO4A6NNW6 628 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 F5H0A9 414 aaPredicted RBP3.39□□□□□ -1.87
VRK1-207ENST00000557352 EPB41L2O43491 1005 aaKnown RBP3.39□□□□□ -1.87
VRK1-207ENST00000557352 BCL2L11O43521 198 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 SH3BP5O60239 455 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 MBD4O95243 580 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 CDH3P22223 829 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 LHCGRP22888 699 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 CSNK2BP67870 215 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 TAF10Q12962 218 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 WDR43Q15061 677 aaKnown RBP eCLIP3.39□□□□□ -1.87
VRK1-207ENST00000557352 ODF4Q2M2E3 257 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 CEP57Q86XR8 500 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 FBXO39Q8N4B4 442 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 POM121L12Q8N7R1 296 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 TEX19Q8NA77 164 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 AQP11Q8NBQ7 271 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 GATAD1Q8WUU5 269 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 COG3Q96JB2 828 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 GAL3ST4Q96RP7 486 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 ZHX3Q9H4I2 956 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 TNNQ9UQP3 1299 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 NUDCQ9Y266 331 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 COL16A1Q07092 1604 aaPredicted RBP3.39□□□□□ -1.87
VRK1-207ENST00000557352 RNF123Q5XPI4 1314 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 NPHP3Q7Z494 1330 aa3.39□□□□□ -1.87
VRK1-207ENST00000557352 ARHGEF10O15013 1369 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 CPDO75976 1380 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 ABCA7Q8IZY2 2146 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 UBR2Q8IWV8 1755 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 OVOS2A0A0G2JMS6 1433 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 ZNF646O15015 1829 aaPredicted RBP3.38□□□□□ -1.87
VRK1-207ENST00000557352 ITGB4P16144 1822 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 IGLV3-10A0A075B6K4 115 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 PTGES3LE9PB15 166 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 EPHB6O15197 1021 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 OR2T7P0C7T2 308 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 SLC2A2P11168 524 aaPredicted RBP3.38□□□□□ -1.87
VRK1-207ENST00000557352 ITIH1P19827 911 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 MNDAP41218 407 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 SLC15A1P46059 708 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 PNLIPRP2P54317 469 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 GUCY2DQ02846 1103 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 ZNF415Q09FC8 603 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 LCN1P1Q5VSP4 162 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 DHRS7BQ6IAN0 325 aaPredicted RBP3.38□□□□□ -1.87
VRK1-207ENST00000557352 KIF6Q6ZMV9 814 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 HPS6Q86YV9 775 aa3.38□□□□□ -1.87
VRK1-207ENST00000557352 C11orf53Q8IXP5 236 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms