RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 GCGRP47871 477 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 SERPINB9P50453 376 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 ARF3P61204 181 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-209ENST00000557342 RPS15AP62244 130 aaKnown RBP11.94□□□□□ -0.5
SLIRP-209ENST00000557342 CYP4F2P78329 520 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 CSHL1Q14406 222 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 NCF4Q15080 339 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 CDKL4Q5MAI5 379 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 MROH9Q5TGP6 573 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 C1orf189Q5VU69 101 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 LCN10Q6JVE6 187 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 BORAQ6PGQ7 559 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 FAM198BQ6UWH4 519 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 TTLL10Q6ZVT0 673 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 CMC1Q7Z7K0 106 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 GPSM1Q86YR5 675 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 OR4N4Q8N0Y3 316 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 ENDOVQ8N8Q3 282 aaKnown RBP11.94□□□□□ -0.5
SLIRP-209ENST00000557342 SLC44A1Q8WWI5 657 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 KIAA1191Q96A73 305 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 PYCR2Q96C36 320 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 MRRFQ96E11 262 aaKnown RBP11.94□□□□□ -0.5
SLIRP-209ENST00000557342 OR2A5Q96R48 311 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 ARHGAP9Q9BRR9 750 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 NMRAL1Q9HBL8 299 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 CUEDC1Q9NWM3 386 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-209ENST00000557342 IFT80Q9P2H3 777 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-209ENST00000557342 NDOR1Q9UHB4 597 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 TLK1Q9UKI8 766 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 ACOT9Q9Y305 439 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 DYRK1BQ9Y463 629 aa11.94□□□□□ -0.5
SLIRP-209ENST00000557342 KCNE1BA0A087WTH5 132 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 CCDC189A1A4V9 331 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 HAT1O14929 419 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 NRP2O60462 931 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 ONECUT2O95948 504 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 S100BP04271 92 aaPredicted RBP11.93□□□□□ -0.5
SLIRP-209ENST00000557342 CAPN1P07384 714 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 ABHD2P08910 425 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 LTA4HP09960 611 aaKnown RBP11.93□□□□□ -0.5
SLIRP-209ENST00000557342 SLC35E2BP0CK96 405 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 CNTFP26441 200 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 MSH2P43246 934 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 SERPINB8P50452 374 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 CCR8P51685 355 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 PMS2P54278 862 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 CSNK1G2P78368 415 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 ERV3-1Q14264 604 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 TGFBIQ15582 683 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 TBR1Q16650 682 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 UGT8Q16880 541 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 MUM1Q2TAK8 710 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 PRTGQ2VWP7 1150 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 NKAIN1Q4KMZ8 207 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 TEX35Q5T0J7 233 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 GARNL3Q5VVW2 1013 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 MLIPQ5VWP3 458 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 PRMT9Q6P2P2 845 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 CNPY4Q8N129 248 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 TBC1D19Q8N5T2 526 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 CSNK1A1LQ8N752 337 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 ABHD11Q8NFV4 315 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 STAG3L4Q8TBR4 150 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 THAP4Q8WY91 577 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 CABS1Q96KC9 395 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 PAFAH2Q99487 392 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 CNOT10Q9H9A5 744 aaKnown RBP11.93□□□□□ -0.5
SLIRP-209ENST00000557342 STARD5Q9NSY2 213 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 ZNF180Q9UJW8 692 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 TCFL5Q9UL49 500 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 RNF112Q9ULX5 631 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 POLHQ9Y253 713 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 KCNE2Q9Y6J6 123 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 NUP210LQ5VU65 1888 aa11.93□□□□□ -0.5
SLIRP-209ENST00000557342 CDC14CA4D256 554 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 EIF4E1BA6NMX2 242 aaKnown RBP11.92□□□□□ -0.5
SLIRP-209ENST00000557342 POC1B-GALNT4F8VUJ3 575 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 KRT38O76015 456 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 IPO13O94829 963 aaKnown RBP11.92□□□□□ -0.5
SLIRP-209ENST00000557342 ALBP02768 609 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 SFTPCP11686 197 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 CDH1P12830 882 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 TYK2P29597 1187 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 CCR10P46092 362 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 RPS18P62269 152 aaKnown RBP11.92□□□□□ -0.5
SLIRP-209ENST00000557342 BMPR2Q13873 1038 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 NDUFA9Q16795 377 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 FAM83EQ2M2I3 478 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 ZXDCQ2QGD7 858 aaPredicted RBP11.92□□□□□ -0.5
SLIRP-209ENST00000557342 UBAP2Q5T6F2 1119 aaKnown RBP11.92□□□□□ -0.5
SLIRP-209ENST00000557342 LGSNQ5TDP6 509 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 SULT1C3Q6IMI6 304 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 THOC6Q86W42 341 aaKnown RBP11.92□□□□□ -0.5
SLIRP-209ENST00000557342 KLHDC8AQ8IYD2 350 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 SPATA6LQ8N4H0 392 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 LRRN4CLQ8ND94 238 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 OR4K1Q8NGD4 311 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 SLC5A11Q8WWX8 675 aa11.92□□□□□ -0.5
SLIRP-209ENST00000557342 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.92□□□□□ -0.5
SLIRP-209ENST00000557342 EXTL1Q92935 676 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms