RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 VN1R1Q9GZP7 353 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 PIH1D1Q9NWS0 290 aaKnown RBP11.85□□□□□ -0.51
PSEN1-221ENST00000557293 TEKT2Q9UIF3 430 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 SLC39A10Q9ULF5 831 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 RNF6Q9Y252 685 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 NFS1Q9Y697 457 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 AKAP6Q13023 2319 aa11.85□□□□□ -0.51
PSEN1-221ENST00000557293 A0A0A6YYC8 382 aaPredicted RBP11.84□□□□□ -0.51
PSEN1-221ENST00000557293 IGKV1-8A0A0C4DH67 115 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 FOXO6A8MYZ6 492 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 I3L1I5 382 aaPredicted RBP11.84□□□□□ -0.51
PSEN1-221ENST00000557293 PRRG2O14669 202 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 PSTPIP1O43586 416 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 SPOPO43791 374 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 C1orf105O95561 183 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 TSPAN12O95859 305 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 C8orf89P0DMQ9 161 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 FOSL1P15407 271 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 PTGER1P34995 402 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 SEMA3AQ14563 771 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 BTBD16Q32M84 506 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 ZNF534Q76KX8 674 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 KRT222Q8N1A0 295 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 RPRMLQ8N4K4 120 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 OR13J1Q8NGT2 312 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 FAM57AQ8TBR7 257 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 ASZ1Q8WWH4 475 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 RAD51AP1Q96B01 352 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 IQCDQ96DY2 449 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 SPATA13Q96N96 652 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 FAM118BQ9BPY3 351 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 ZNF559Q9BR84 538 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 PLCD4Q9BRC7 762 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 UTP23Q9BRU9 249 aaKnown RBP11.84□□□□□ -0.51
PSEN1-221ENST00000557293 ZNF358Q9NW07 568 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 COQ3Q9NZJ6 369 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 KCNN3Q9UGI6 736 aa11.84□□□□□ -0.51
PSEN1-221ENST00000557293 TMEM200CA6NKL6 621 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 PRPF4O43172 522 aaKnown RBP eCLIP11.83□□□□□ -0.52
PSEN1-221ENST00000557293 METTL18O95568 372 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 RPN2P04844 631 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 RBP3P10745 1247 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 DRD2P14416 443 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 CD46P15529 392 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 BDKRB1P46663 353 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 NR0B1P51843 470 aaKnown RBP11.83□□□□□ -0.52
PSEN1-221ENST00000557293 UBASH3AP57075 661 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 MEP1AQ16819 746 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 EMC4Q5J8M3 183 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 GARNL3Q5VVW2 1013 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 CES4AQ5XG92 561 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 ANKRD37Q7Z713 158 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 TMEM200AQ86VY9 491 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 PAQR7Q86WK9 346 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 CPSF7Q8N684 471 aaKnown RBP11.83□□□□□ -0.52
PSEN1-221ENST00000557293 CSNK1A1LQ8N752 337 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 TMEM178AQ8NBL3 297 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 CHDHQ8NE62 594 aaPredicted RBP11.83□□□□□ -0.52
PSEN1-221ENST00000557293 ASB5Q8WWX0 329 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 KRT35Q92764 455 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 NINJ1Q92982 152 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 OLFM1Q99784 485 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 KCNK13Q9HB14 408 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 SPTLC3Q9NUV7 552 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 SLC2A6Q9UGQ3 507 aa11.83□□□□□ -0.52
PSEN1-221ENST00000557293 RUVBL2Q9Y230 463 aaKnown RBP11.83□□□□□ -0.52
PSEN1-221ENST00000557293 R3HDM2Q9Y2K5 976 aaKnown RBP11.83□□□□□ -0.52
PSEN1-221ENST00000557293 A0A1B0GTH9 108 aa11.82□□□□□ -0.52
PSEN1-221ENST00000557293 SOWAHDA6NJG2 315 aa11.82□□□□□ -0.52
PSEN1-221ENST00000557293 GABRR3A8MPY1 467 aa11.82□□□□□ -0.52
PSEN1-221ENST00000557293 P2RX6O15547 441 aa11.82□□□□□ -0.52
PSEN1-221ENST00000557293 GOT2P00505 430 aaKnown RBP11.82□□□□□ -0.52
PSEN1-221ENST00000557293 DLX5P56178 289 aa11.82□□□□□ -0.52
PSEN1-221ENST00000557293 EIF3EP60228 445 aaKnown RBP11.82□□□□□ -0.52
PSEN1-221ENST00000557293 LTBQ06643 244 aa11.82□□□□□ -0.52
PSEN1-221ENST00000557293 CCDC38Q502W7 563 aa11.82□□□□□ -0.52
PSEN1-221ENST00000557293 ZNF425Q6IV72 752 aa11.82□□□□□ -0.52
PSEN1-221ENST00000557293 CCDC71Q8IV32 467 aaPredicted RBP11.82□□□□□ -0.52
PSEN1-221ENST00000557293 M1APQ8TC57 530 aa11.82□□□□□ -0.52
PSEN1-221ENST00000557293 ZNF778Q96MU6 729 aa11.82□□□□□ -0.52
PSEN1-221ENST00000557293 DNAJC7Q99615 494 aa11.82□□□□□ -0.52
PSEN1-221ENST00000557293 MDFIQ99750 246 aa11.82□□□□□ -0.52
PSEN1-221ENST00000557293 ACAT2Q9BWD1 397 aa11.82□□□□□ -0.52
PSEN1-221ENST00000557293 RAB11FIP5Q9BXF6 653 aa11.82□□□□□ -0.52
PSEN1-221ENST00000557293 TRIM45Q9H8W5 580 aaPredicted RBP11.82□□□□□ -0.52
PSEN1-221ENST00000557293 MMP25Q9NPA2 562 aa11.82□□□□□ -0.52
PSEN1-221ENST00000557293 TTC7AQ9ULT0 858 aaPredicted RBP11.82□□□□□ -0.52
PSEN1-221ENST00000557293 FAM90A27PA6NNH2 459 aa11.81□□□□□ -0.52
PSEN1-221ENST00000557293 PROM1O43490 865 aa11.81□□□□□ -0.52
PSEN1-221ENST00000557293 AKR1B10O60218 316 aa11.81□□□□□ -0.52
PSEN1-221ENST00000557293 KLK8O60259 260 aa11.81□□□□□ -0.52
PSEN1-221ENST00000557293 NME2P1O60361 137 aa11.81□□□□□ -0.52
PSEN1-221ENST00000557293 CTAG2O75638 210 aa11.81□□□□□ -0.52
PSEN1-221ENST00000557293 APOA4P06727 396 aa11.81□□□□□ -0.52
PSEN1-221ENST00000557293 ANXA5P08758 320 aa11.81□□□□□ -0.52
PSEN1-221ENST00000557293 ERVK-10P10266 1014 aa11.81□□□□□ -0.52
PSEN1-221ENST00000557293 ERGP11308 486 aa11.81□□□□□ -0.52
PSEN1-221ENST00000557293 NME2P22392 152 aa11.81□□□□□ -0.52
PSEN1-221ENST00000557293 CHRNB4P30926 498 aa11.81□□□□□ -0.52
PSEN1-221ENST00000557293 PTGS2P35354 604 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms