RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 IL1BP01584 269 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 RAC2P15153 192 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 ZNF423Q2M1K9 1284 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 C1orf94Q6P1W5 598 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 DCLRE1AQ6PJP8 1040 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 FOXRED2Q8IWF2 684 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 DRAXINQ8NBI3 349 aaPredicted RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 FUNDC2Q9BWH2 189 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 TAS2R9Q9NYW1 312 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 PPP4R1LQ9P1A2 415 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 ASB4Q9Y574 426 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 OXTRP30559 389 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 NSG1P42857 185 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 MAN2A2P49641 1150 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 RAB8AP61006 207 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 FSTL1Q12841 308 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 ZBTB26Q9HCK0 441 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 MRPL17Q9NRX2 175 aaKnown RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 GJB4Q9NTQ9 266 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 PRAF2O60831 178 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 CHRNB4P30926 498 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 HSD17B7P56937 341 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 FAM46DQ8NEK8 389 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 CELF6Q96J87 481 aaKnown RBP8.62□□□□□ -1.03
SYNE3-205ENST00000557275 LURAP1Q96LR2 239 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 TFR2Q9UP52 801 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 RBBP9O75884 186 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 ACTL6BO94805 426 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 ADH1AP07327 375 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 SIM2Q14190 667 aaPredicted RBP8.62□□□□□ -1.03
SYNE3-205ENST00000557275 GAS6Q14393 721 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 KCTD18Q6PI47 426 aaPredicted RBP8.62□□□□□ -1.03
SYNE3-205ENST00000557275 MYO7BQ6PIF6 2116 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 SLC36A4Q6YBV0 504 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 PIAS4Q8N2W9 510 aaPredicted RBP8.62□□□□□ -1.03
SYNE3-205ENST00000557275 TAS1R2Q8TE23 839 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 SLC13A3Q8WWT9 602 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 FGGYQ96C11 551 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 RNF32Q9H0A6 362 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 AGO1Q9UL18 857 aaKnown RBP8.62□□□□□ -1.03
SYNE3-205ENST00000557275 CYP8B1Q9UNU6 501 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 MGAT4BQ9UQ53 548 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 PI15O43692 258 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 GABBR2O75899 941 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 STK17BO94768 372 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 VIPP01282 170 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 SPAM1P38567 509 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 BTBD16Q32M84 506 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 UGT2A3Q6UWM9 527 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 SLC35G5Q96KT7 338 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 ASB6Q9NWX5 421 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 CNOT6Q9ULM6 557 aaKnown RBP8.62□□□□□ -1.03
SYNE3-205ENST00000557275 MAP4K5Q9Y4K4 846 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 PTCH2Q9Y6C5 1203 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 SPEF2Q9C093 1822 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 NTRK2Q16620 822 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 OR2T5Q6IEZ7 315 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 KLHDC10Q6PID8 442 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 TAS1R3Q7RTX0 852 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 OR2T29Q8NH02 315 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 SLC2A14Q8TDB8 520 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 TMEM80Q96HE8 168 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 BTN2A3PQ96KV6 586 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 PTTG3PQ9NZH4 202 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 TP53TG5Q9Y2B4 290 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 DUSP10Q9Y6W6 482 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 NT5C1B-RDH14C9J2C7 533 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 ALOX15BO15296 676 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 VTCN1Q7Z7D3 282 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 GALNT13Q8IUC8 556 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 SPPL2CQ8IUH8 684 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 SYNE4Q8N205 404 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 TMEM150CB9EJG8 249 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 BLOC1S1P78537 153 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 CAMK2DQ13557 499 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 CTC1Q2NKJ3 1217 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 AGBL3Q8NEM8 1001 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 SLC35F5Q8WV83 523 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 MITD1Q8WV92 249 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 TOR3AQ9H497 397 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 ERVK-18Q9QC07 812 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 C9J4A7 227 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 HTR2BP41595 481 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 FRKP42685 505 aaPredicted RBP8.62□□□□□ -1.03
SYNE3-205ENST00000557275 ST3GAL3Q11203 375 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 REP15Q6BDI9 236 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 SLC44A1Q8WWI5 657 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 CCDC120Q96HB5 630 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 OR4K3Q96R72 315 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 TMEM185BQ9H7F4 350 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 PCDHB9Q9Y5E1 797 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 KIAA1210Q9ULL0 1709 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 RTCAO00442 366 aaKnown RBP8.62□□□□□ -1.03
SYNE3-205ENST00000557275 GRM6O15303 877 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 PRNPP04156 253 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 H1F0P07305 194 aaKnown RBP8.62□□□□□ -1.03
SYNE3-205ENST00000557275 MAGP20916 626 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 KCNC1P48547 511 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 PLP2Q04941 152 aa8.62□□□□□ -1.03
SYNE3-205ENST00000557275 FEM1AQ9BSK4 669 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms