RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 FKBP10Q96AY3 582 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 FAM149B1Q96BN6 582 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 SARAFQ96BY9 339 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 FAM136AQ96C01 138 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 INTS12Q96CB8 462 aaKnown RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 SERPINB12Q96P63 405 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 RNF157Q96PX1 679 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 PAIP2Q9BPZ3 127 aaKnown RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 CAPS2Q9BXY5 557 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 MRPL1Q9BYD6 325 aaKnown RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 SLC5A7Q9GZV3 580 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 NEUROG2Q9H2A3 272 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 SLC25A32Q9H2D1 315 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 FAM83DQ9H4H8 585 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 POPDC2Q9HBU9 364 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 DMAP1Q9NPF5 467 aaPredicted RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.04□□□□□ -1.6
SRP54-211ENST00000556445 LIN7CQ9NUP9 197 aaKnown RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 DDX18Q9NVP1 670 aaKnown RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 PAK5Q9P286 719 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 DNPEPQ9ULA0 475 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 WDR37Q9Y2I8 494 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 R3HDM2Q9Y2K5 976 aaKnown RBP5.04□□□□□ -1.6
SRP54-211ENST00000556445 NFS1Q9Y697 457 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 THSD7BQ9C0I4 1608 aa5.04□□□□□ -1.6
SRP54-211ENST00000556445 GRIN2DO15399 1336 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 A0A087WUV0 522 aaPredicted RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 CCDC187A0A096LP49 1063 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 A0A0G2JPF8 293 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 LINC00854A0A1B0GVQ3 168 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 BCLAF3A2AJT9 711 aaKnown RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 AQP7P3A6NL99 342 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 CDRT15L2A8MXV6 281 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 HNRNPCL3B7ZW38 293 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 H7C0C1 242 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 SYN3O14994 580 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 CCNT2O60583 730 aaKnown RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 HNRNPCL1O60812 293 aaKnown RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 SHOX2O60902 331 aaPredicted RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 CDH16O75309 829 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 ALPPP05187 535 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 URODP06132 367 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 HNRNPCL4P0DMR1 293 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 ALPPL2P10696 532 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 GABRB1P18505 474 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 TTKP33981 857 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 PTDSS1P48651 473 aaKnown RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 HCAR3P49019 387 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 CLCNKBP51801 687 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 BMXP51813 675 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 DAOAP59103 153 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 OLR1P78380 273 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 SARNPP82979 210 aaKnown RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 ARHGAP8P85298 464 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 CDK16Q00536 496 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 RNASELQ05823 741 aaKnown RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 DEUP1Q05D60 604 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 RUNX1T1Q06455 604 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 ADIGQ0VDE8 80 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 GPS1Q13098 491 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 DPYSL3Q14195 570 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 UAP1Q16222 522 aaPredicted RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 CDO1Q16878 200 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 C15orf59Q2T9L4 293 aaPredicted RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 SMTNL2Q2TAL5 461 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 P3H1Q32P28 736 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 SLC9B1Q4ZJI4 515 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 TSTD2Q5T7W7 516 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 SLC9A4Q6AI14 798 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 CDC73Q6P1J9 531 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 FAM171BQ6P995 826 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 ANGPTL8Q6UXH0 198 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 CLEC20AQ6ZU45 233 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 MARK2Q7KZI7 788 aaKnown RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 TRABD2AQ86V40 505 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 PDIK1LQ8N165 341 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 VPS52Q8N1B4 723 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 ARHGAP18Q8N392 663 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 ARFGAP1Q8N6T3 406 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 DRAXINQ8NBI3 349 aaPredicted RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 ATAD1Q8NBU5 361 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 RFWD2Q8NHY2 731 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 SLC13A3Q8WWT9 602 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 SEPT8Q92599 483 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 NT5C3BQ969T7 300 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 NTAN1Q96AB6 310 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 FAF2Q96CS3 445 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 TMCO6Q96DC7 493 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 LRRC39Q96DD0 335 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 RTP4Q96DX8 246 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 SAT2Q96F10 170 aaPredicted RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 GIMAP5Q96F15 307 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 PGAM5Q96HS1 289 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 SLC46A1Q96NT5 459 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 WDFY2Q96P53 400 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 NPY6RQ99463 290 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 SLC25A23Q9BV35 468 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 SNRNP25Q9BV90 132 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms