RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 TRHRP34981 398 aaPredicted RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 DBPQ10586 325 aaPredicted RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 TRAF2Q12933 501 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 TGFBIQ15582 683 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CYP2A13Q16696 494 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 UAP1L1Q3KQV9 507 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 RAET1GQ6H3X3 334 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CNKSR3Q6P9H4 555 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 BHLHB9Q6PI77 547 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 LAYNQ6UX15 382 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 ADGRG6Q86SQ4 1221 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 GLRX5Q86SX6 157 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 TCEAL8Q8IYN2 117 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 KLHL36Q8N4N3 616 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CPSF7Q8N684 471 aaKnown RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 ACTRT2Q8TDY3 377 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 SNX19Q92543 992 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 EID2BQ96D98 161 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 ALG14Q96F25 216 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 MARK4Q96L34 752 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 NEURL2Q9BR09 285 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 SPON2Q9BUD6 331 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CRISPLD2Q9H0B8 497 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 ALG9Q9H6U8 611 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 ZDHHC4Q9NPG8 344 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 ITM2CQ9NQX7 267 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 NLE1Q9NVX2 485 aaPredicted RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 SMPD4Q9NXE4 827 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 THUMPD1Q9NXG2 353 aaKnown RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 DNMT3BQ9UBC3 853 aaKnown RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CDH22Q9UJ99 828 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 ASB4Q9Y574 426 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 PCDHGC4Q9Y5F7 938 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 RHPN2P1A8MT19 583 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 K7ERQ8 282 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 TOR1AO14656 332 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 AQP9O43315 295 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 GLP2RO95838 553 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 NTRK1P04629 796 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 RHOCP08134 193 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 ACAA1P09110 424 aaPredicted RBP4.95□□□□□ -1.62
TMEM260-210ENST00000556422 HNF1AP20823 631 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 PRDX6P30041 224 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 CCR4P51679 360 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 C21orf59P57076 290 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 UBE2IP63279 158 aaKnown RBP4.95□□□□□ -1.62
TMEM260-210ENST00000556422 TWF1Q12792 350 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 RAB33AQ14088 237 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 OR4D1Q15615 310 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 TRMT5Q32P41 509 aaKnown RBP4.95□□□□□ -1.62
TMEM260-210ENST00000556422 C1orf53Q5VUE5 145 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 KIAA1841Q6NSI8 718 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 FAM45BPQ6NSW5 357 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 PSAPL1Q6NUJ1 521 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 Q6ZNB5 142 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 DCP2Q8IU60 420 aaKnown RBP4.95□□□□□ -1.62
TMEM260-210ENST00000556422 KBTBD2Q8IY47 623 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 PIANPQ8IYJ0 282 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 PRSS58Q8IYP2 241 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 CYP4Z2PQ8N1L4 340 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 NKAPQ8N5F7 415 aaKnown RBP4.95□□□□□ -1.62
TMEM260-210ENST00000556422 OR4L1Q8NH43 312 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 FAM45AQ8TCE6 357 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 DTX3LQ8TDB6 740 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 FAM136AQ96C01 138 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 CMTM5Q96DZ9 223 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 FAM122AQ96E09 287 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 PHF21BQ96EK2 531 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 BIRC8Q96P09 236 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 KCNC2Q96PR1 638 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 ATOH8Q96SQ7 321 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 VRK1Q99986 396 aaPredicted RBP4.95□□□□□ -1.62
TMEM260-210ENST00000556422 TP63Q9H3D4 680 aaPredicted RBP4.95□□□□□ -1.62
TMEM260-210ENST00000556422 WDR26Q9H7D7 661 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 CATSPERZQ9NTU4 200 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 GALPQ9UBC7 116 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 LHX3Q9UBR4 397 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 DIMT1Q9UNQ2 313 aaKnown RBP4.95□□□□□ -1.62
TMEM260-210ENST00000556422 INSL5Q9Y5Q6 135 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 SLC22A7Q9Y694 548 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 A0A1B0GTL3 188 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 OR6C70A6NIJ9 312 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 ZNF879B4DU55 563 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 PPP6CO00743 305 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 MFN2O95140 757 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 FABP1P07148 127 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 NCF1P14598 390 aaPredicted RBP4.95□□□□□ -1.62
TMEM260-210ENST00000556422 OGNP20774 298 aaKnown RBP4.95□□□□□ -1.62
TMEM260-210ENST00000556422 PIK3R1P27986 724 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 DPP6P42658 865 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 CDC34P49427 236 aaPredicted RBP4.95□□□□□ -1.62
TMEM260-210ENST00000556422 PRKCQQ04759 706 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 GSTA3Q16772 222 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 PPP1R3AQ16821 1122 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 EML3Q32P44 896 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 ZNF678Q5SXM1 525 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 RNF219Q5W0B1 726 aaPredicted RBP4.95□□□□□ -1.62
TMEM260-210ENST00000556422 GALNT18Q6P9A2 607 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 PAGE2Q7Z2X7 111 aa4.95□□□□□ -1.62
TMEM260-210ENST00000556422 LRRTM4Q86VH4 590 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms