RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 HIST1H2AHQ96KK5 128 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 RBBP8Q99708 897 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 HIST1H2AJQ99878 128 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 H2AFJQ9BTM1 129 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 DHRS4Q9BTZ2 278 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 SEMA4CQ9C0C4 833 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 PCBD2Q9H0N5 130 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 ADNPQ9H2P0 1102 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 LRRC4CQ9HCJ2 640 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 TUBD1Q9UJT1 453 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 TCFL5Q9UL49 500 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 SNX7Q9UNH6 387 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 CCDC88CQ9P219 2028 aa11.04□□□□□ -0.64
SLIRP-205ENST00000556310 FASNP49327 2511 aaKnown RBP11.03□□□□□ -0.64
SLIRP-205ENST00000556310 DSCR3O14972 297 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 SFTPCP11686 197 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 HRH2P25021 359 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 SLC12A2P55011 1212 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 VSX2P58304 361 aaPredicted RBP11.03□□□□□ -0.64
SLIRP-205ENST00000556310 NFKB2Q00653 900 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 POU4F1Q01851 419 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 RELAQ04206 551 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 NAB1Q13506 487 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 ZNF460Q14592 562 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 PPP1R3AQ16821 1122 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 KBTBD12Q3ZCT8 623 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 NKAIN1Q4KMZ8 207 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 GLE1Q53GS7 698 aaKnown RBP11.03□□□□□ -0.64
SLIRP-205ENST00000556310 WASHC2DQ5SRD0 308 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 SBSNQ6UWP8 590 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 CEP128Q6ZU80 1094 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 TTLL10Q6ZVT0 673 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 CEP97Q8IW35 865 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 ATL1Q8WXF7 558 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 THAP4Q8WY91 577 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 FKBP10Q96AY3 582 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 TSPAN17Q96FV3 270 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 GPR22Q99680 433 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 SGPP1Q9BX95 441 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 TRIM54Q9BYV2 358 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 GPAMQ9HCL2 828 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 CUTCQ9NTM9 273 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 ABCF3Q9NUQ8 709 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 CUEDC1Q9NWM3 386 aaPredicted RBP11.03□□□□□ -0.64
SLIRP-205ENST00000556310 GEMIN8Q9NWZ8 242 aaKnown RBP11.03□□□□□ -0.64
SLIRP-205ENST00000556310 ARL15Q9NXU5 204 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 IFT80Q9P2H3 777 aaPredicted RBP11.03□□□□□ -0.64
SLIRP-205ENST00000556310 MTRF1LQ9UGC7 380 aaKnown RBP11.03□□□□□ -0.64
SLIRP-205ENST00000556310 NDOR1Q9UHB4 597 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 GPN3Q9UHW5 284 aaPredicted RBP11.03□□□□□ -0.64
SLIRP-205ENST00000556310 DMGDHQ9UI17 866 aaKnown RBP11.03□□□□□ -0.64
SLIRP-205ENST00000556310 NOVA2Q9UNW9 492 aaKnown RBP11.03□□□□□ -0.64
SLIRP-205ENST00000556310 MAN2B2Q9Y2E5 1009 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 KCNMB2Q9Y691 235 aa11.03□□□□□ -0.64
SLIRP-205ENST00000556310 LOC105369274A0A096LPK9 316 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 LOC102723532A0A0G2JNH3 316 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 WISP3O95389 354 aaPredicted RBP11.02□□□□□ -0.65
SLIRP-205ENST00000556310 ONECUT2O95948 504 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 CD63P08962 238 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 ITGAXP20702 1163 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 PMS2P54278 862 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 KCNAB2Q13303 367 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 NAE1Q13564 534 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 PRTGQ2VWP7 1150 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 FAM214AQ32MH5 1076 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 CAPN13Q6MZZ7 669 aaPredicted RBP11.02□□□□□ -0.65
SLIRP-205ENST00000556310 FBXO42Q6P3S6 717 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 LCTLQ6UWM7 567 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 ADCK2Q7Z695 626 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 ADAMTSL2Q86TH1 951 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 C17orf64Q86WR6 236 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 CTAGE3PQ8IX95 158 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 OR4N4Q8N0Y3 316 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 ZNF843Q8N446 348 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 PPM1NQ8N819 430 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 ADAMTS17Q8TE56 1095 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 FBF1Q8TES7 1133 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 FBXL8Q96CD0 374 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 TSPYL1Q9H0U9 437 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 ATG10Q9H0Y0 220 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 STARD5Q9NSY2 213 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 IKZF3Q9UKT9 509 aa11.02□□□□□ -0.65
SLIRP-205ENST00000556310 MTO1Q9Y2Z2 717 aaKnown RBP11.02□□□□□ -0.65
SLIRP-205ENST00000556310 GCN1Q92616 2671 aaKnown RBP11.01□□□□□ -0.65
SLIRP-205ENST00000556310 HYKKA2RU49 373 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 NPEPPSL1A6NEC2 478 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 H0YGG7 62 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 HAT1O14929 419 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 KLF7O75840 302 aaPredicted RBP11.01□□□□□ -0.65
SLIRP-205ENST00000556310 EIF2S1P05198 315 aaKnown RBP11.01□□□□□ -0.65
SLIRP-205ENST00000556310 PIM1P11309 404 aaPredicted RBP11.01□□□□□ -0.65
SLIRP-205ENST00000556310 STMN1P16949 149 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 ALAS2P22557 587 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 SPRP35270 261 aaPredicted RBP11.01□□□□□ -0.65
SLIRP-205ENST00000556310 ARF3P61204 181 aaPredicted RBP11.01□□□□□ -0.65
SLIRP-205ENST00000556310 CDKL1Q00532 357 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 C19orf57Q0VDD7 668 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 USP10Q14694 798 aaKnown RBP11.01□□□□□ -0.65
SLIRP-205ENST00000556310 SLC9A5Q14940 896 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 ZKSCAN8Q15776 578 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms