RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 KRTAP9-2Q9BYQ4 174 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 ACPTQ9BZG2 426 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 TRIM15Q9C019 465 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 OR52A5Q9H2C5 316 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 C8orf33Q9H7E9 229 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 RMI1Q9H9A7 625 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 BRF2Q9HAW0 419 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 FARSBQ9NSD9 589 aaKnown RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 INTS7Q9NVH2 962 aaKnown RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 SPATA6Q9NWH7 488 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 CMTM6Q9NX76 183 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 SIRT5Q9NXA8 310 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 ACTR3BQ9P1U1 418 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 ZNHIT2Q9UHR6 403 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 MCM8Q9UJA3 840 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 KCNE2Q9Y6J6 123 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 CHD7Q9P2D1 2997 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 NME4O00746 187 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 PLRG1O43660 514 aaKnown RBP8.02□□□□□ -1.13
ATXN3-235ENST00000556082 EIF4EBP3O60516 100 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-235ENST00000556082 STAMBPO95630 424 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 BAG2O95816 211 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 SLC16A8O95907 504 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 BCKDHAP12694 445 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 NPPBP16860 134 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 DRD1P21728 446 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 ITPKAP23677 461 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 SLC7A1P30825 629 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 CLNS1AP54105 237 aaKnown RBP8.02□□□□□ -1.13
ATXN3-235ENST00000556082 RPL38P63173 70 aaKnown RBP8.02□□□□□ -1.13
ATXN3-235ENST00000556082 MRPS21P82921 87 aaKnown RBP8.02□□□□□ -1.13
ATXN3-235ENST00000556082 HMGCS1Q01581 520 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 DMPKQ09013 629 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 NFYCQ13952 458 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 DOC2AQ14183 400 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 STARD3Q14849 445 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 TAF11Q15544 211 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 MUM1Q2TAK8 710 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 SGO1Q5FBB7 561 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 XKR6Q5GH73 641 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 PAGE3Q5JUK9 113 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 C6orf10Q5SRN2 563 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 OGFRL1Q5TC84 451 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-235ENST00000556082 LCN8Q6JVE9 175 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 CAPN13Q6MZZ7 669 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-235ENST00000556082 ALKBH2Q6NS38 261 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 LAYNQ6UX15 382 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 USP30Q70CQ3 517 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 PDZD3Q86UT5 571 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 TRIM74Q86UV6 250 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 LRRTM4Q86VH4 590 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 HEATR4Q86WZ0 1026 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 DHFR2Q86XF0 187 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 LILRA3Q8N6C8 439 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-235ENST00000556082 PLA2G15Q8NCC3 412 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 CATSPER1Q8NEC5 780 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 BHLHE22Q8NFJ8 381 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-235ENST00000556082 ADCY4Q8NFM4 1077 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 OR8J3Q8NGG0 315 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 ZNF480Q8WV37 535 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 DNASE1L2Q92874 299 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 VPS33AQ96AX1 596 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 RAD51AP1Q96B01 352 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 TESCQ96BS2 214 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 PYCR2Q96C36 320 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 REPS1Q96D71 796 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 C11orf24Q96F05 449 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-235ENST00000556082 OR4K3Q96R72 315 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 ZNF184Q99676 751 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-235ENST00000556082 SH3GL1Q99961 368 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 EFCAB11Q9BUY7 163 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 C1QTNF7Q9BXJ2 289 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 ZDHHC5Q9C0B5 715 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 ATG10Q9H0Y0 220 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 ZNF576Q9H609 170 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 CLMPQ9H6B4 373 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 PREBQ9HCU5 417 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 ARMC1Q9NVT9 282 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 ACSL5Q9ULC5 683 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 FZD4Q9ULV1 537 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 PPT2Q9UMR5 302 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 MAPRE3Q9UPY8 281 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 LRCH1Q9Y2L9 728 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 MTCH2Q9Y6C9 303 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 DENND4AQ7Z401 1863 aa8.02□□□□□ -1.13
ATXN3-235ENST00000556082 DOCK8Q8NF50 2099 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 PIKFYVEQ9Y2I7 2098 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 TMEM265A0A087WTH1 108 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 KANSL1LA0AUZ9 987 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 ANTXRLA6NF34 631 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 PRR19A6NJB7 356 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 H0YJX3 145 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 FOXE1O00358 373 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-235ENST00000556082 KMOO15229 486 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 PI15O43692 258 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 ERN1O75460 977 aaKnown RBP8.01□□□□□ -1.13
ATXN3-235ENST00000556082 RNASEH2AO75792 299 aaKnown RBP8.01□□□□□ -1.13
ATXN3-235ENST00000556082 PCDH8O95206 1070 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 RPN2P04844 631 aa8.01□□□□□ -1.13
ATXN3-235ENST00000556082 UMPSP11172 480 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms