RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 LOXL2Q9Y4K0 774 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 PCDHGA8Q9Y5G5 932 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 ACACAQ13085 2346 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 TMEM120BA0PK00 339 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 OR2A25A4D2G3 310 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 FAM149AA5PLN7 773 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 G3V2L1 256 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 E2F3O00716 465 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 POLR1CO15160 346 aaPredicted RBP7.33□□□□□ -1.24
TDP1-214ENST00000556063 BIRC5O15392 142 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 HYAL3O43820 417 aaPredicted RBP7.33□□□□□ -1.24
TDP1-214ENST00000556063 UGDHO60701 494 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 SASH3O75995 380 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 SIX3O95343 332 aaPredicted RBP7.33□□□□□ -1.24
TDP1-214ENST00000556063 MLYCDO95822 493 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 OTCP00480 354 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 RPS17P08708 135 aaKnown RBP7.33□□□□□ -1.24
TDP1-214ENST00000556063 SBK3P0C264 359 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 CDH1P12830 882 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 CREB1P16220 341 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 GSTM2P28161 218 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 HPDP32754 393 aaPredicted RBP7.33□□□□□ -1.24
TDP1-214ENST00000556063 HNF4AP41235 474 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 LSSP48449 732 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 CCNG1P51959 295 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 PDX1P52945 283 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 CSNK1G2P78368 415 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 MC2RQ01718 297 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 CHIT1Q13231 466 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 TUBB3Q13509 450 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 TBCCQ15814 346 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 ZXDCQ2QGD7 858 aaPredicted RBP7.33□□□□□ -1.24
TDP1-214ENST00000556063 C18orf21Q32NC0 220 aaPredicted RBP7.33□□□□□ -1.24
TDP1-214ENST00000556063 FBXO48Q5FWF7 155 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 XKR6Q5GH73 641 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 C3orf38Q5JPI3 329 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 TCTE1Q5JU00 501 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 DCAF12Q5T6F0 453 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 LIPMQ5VYY2 423 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 ATG9BQ674R7 924 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 ZNF425Q6IV72 752 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 FOXR1Q6PIV2 292 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 CEACAM20Q6UY09 585 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 ERMP1Q7Z2K6 904 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 GOLGA7Q7Z5G4 137 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 PAQR7Q86WK9 346 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 PPP1R3BQ86XI6 285 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 MYLK4Q86YV6 388 aaPredicted RBP7.33□□□□□ -1.24
TDP1-214ENST00000556063 NUDCD3Q8IVD9 361 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 MCATQ8IVS2 390 aaKnown RBP7.33□□□□□ -1.24
TDP1-214ENST00000556063 TRIM42Q8IWZ5 723 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 FAM20CQ8IXL6 584 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 ZNF655Q8N720 491 aaPredicted RBP7.33□□□□□ -1.24
TDP1-214ENST00000556063 ANKRD42Q8N9B4 389 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 TTLQ8NG68 377 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 OR4K1Q8NGD4 311 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 NEIL2Q969S2 332 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 ARL8AQ96BM9 186 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 REPS1Q96D71 796 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 NXPE2Q96DL1 559 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 L3HYPDHQ96EM0 354 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 PTCD3Q96EY7 689 aaKnown RBP7.33□□□□□ -1.24
TDP1-214ENST00000556063 SEC16BQ96JE7 1060 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 PPM1MQ96MI6 270 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 FCRL4Q96PJ5 515 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 OR4K3Q96R72 315 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 OR6C1Q96RD1 312 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 TAAR9Q96RI9 348 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 ZFYVE21Q9BQ24 234 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 ZPBPQ9BS86 351 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 TRMOQ9BU70 441 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 B3GNT4Q9C0J1 378 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 NRSN2Q9GZP1 204 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 IPPKQ9H8X2 491 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 SLC6A20Q9NP91 592 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 FBXO8Q9NRD0 319 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 CUEDC1Q9NWM3 386 aaPredicted RBP7.33□□□□□ -1.24
TDP1-214ENST00000556063 OXSMQ9NWU1 459 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 SLC39A1Q9NY26 324 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 SLC17A7Q9P2U7 560 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 PISDQ9UG56 409 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 NEUROG3Q9Y4Z2 214 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 AP1M2Q9Y6Q5 423 aa7.33□□□□□ -1.24
TDP1-214ENST00000556063 WDR87Q6ZQQ6 2873 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 KCNE1BA0A087WTH5 132 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 A0A0J9YVX5 310 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 TRBC2A0A5B9 178 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 TMEM150CB9EJG8 249 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 E7EQ34 232 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 CASC3O15234 703 aaKnown RBP7.32□□□□□ -1.24
TDP1-214ENST00000556063 OR1F1O43749 312 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 OR2B3O76000 313 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 CLDN9O95484 217 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 BPGMP07738 259 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 ADRB1P08588 477 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 HBQ1P09105 142 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 EBLN1P0CF75 366 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 FOLR1P15328 257 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 SERPINB1P30740 379 aa7.32□□□□□ -1.24
TDP1-214ENST00000556063 AHRP35869 848 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms