RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 ABHD11Q8NFV4 315 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 CCT6BQ92526 530 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 NCSTNQ92542 709 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 UBE2E3Q969T4 207 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 REPS1Q96D71 796 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 WDR34Q96EX3 536 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 ZDHHC12Q96GR4 267 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 KCNA7Q96RP8 456 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 CCT8L2Q96SF2 557 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 DPH7Q9BTV6 452 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 PITHD1Q9GZP4 211 aaPredicted RBP10.62□□□□□ -0.71
TMEM260-208ENST00000555905 TWSG1Q9GZX9 223 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 ELOVL6Q9H5J4 265 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 RABEP2Q9H5N1 569 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 PRM3Q9NNZ6 103 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 TNFRSF12AQ9NP84 129 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 NPHS2Q9NP85 383 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 TMEM184CQ9NVA4 438 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 PSD3Q9NYI0 1048 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 FTSJ1Q9UET6 329 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 ZNF225Q9UK10 706 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 POMT2Q9UKY4 750 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 SNX6Q9UNH7 406 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 BTBD3Q9Y2F9 522 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 USH1CQ9Y6N9 552 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 U3KQA8 63 aa10.62□□□□□ -0.71
TMEM260-208ENST00000555905 GOLGA4Q13439 2230 aaKnown RBP10.62□□□□□ -0.71
TMEM260-208ENST00000555905 GPR179Q6PRD1 2367 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 COL5A1P20908 1838 aaPredicted RBP10.61□□□□□ -0.71
TMEM260-208ENST00000555905 A0A0J9YY10 115 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 EME2A4GXA9 379 aaPredicted RBP10.61□□□□□ -0.71
TMEM260-208ENST00000555905 PROB1E7EW31 1015 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 H7BY64 318 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 MANBAO00462 879 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 FFAR3O14843 346 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 GPR42O15529 346 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 PRAMEF4O60810 478 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 FAM107AO95990 144 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 SERPINB3P29508 390 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 FOXA1P55317 472 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 E2F2Q14209 437 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 SLBPQ14493 270 aaKnown RBP eCLIP10.61□□□□□ -0.71
TMEM260-208ENST00000555905 ZRSR2Q15696 482 aaKnown RBP10.61□□□□□ -0.71
TMEM260-208ENST00000555905 PDCD2Q16342 344 aaPredicted RBP10.61□□□□□ -0.71
TMEM260-208ENST00000555905 AMZ1Q400G9 498 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 C10orf62Q5T681 223 aaPredicted RBP10.61□□□□□ -0.71
TMEM260-208ENST00000555905 PRAMEF9Q5VWM5 478 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 NKAIN2Q5VXU1 208 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 KIAA1614Q5VZ46 1190 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 MED27Q6P2C8 311 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 SPATA21Q7Z572 469 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 SPRED1Q7Z699 444 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 PLXDC1Q8IUK5 500 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 DDIASQ8IXT1 998 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 OR4K1Q8NGD4 311 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 FLVCR1-AS1Q8TAF5 88 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 IFI44Q8TCB0 444 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 TWIST2Q8WVJ9 160 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 THOC1Q96FV9 657 aaKnown RBP10.61□□□□□ -0.71
TMEM260-208ENST00000555905 CNDP2Q96KP4 475 aaKnown RBP10.61□□□□□ -0.71
TMEM260-208ENST00000555905 PRAP1Q96NZ9 151 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 CD180Q99467 661 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 CCT7Q99832 543 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 ELAC2Q9BQ52 826 aaKnown RBP10.61□□□□□ -0.71
TMEM260-208ENST00000555905 RAB33BQ9H082 229 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 ABCG4Q9H172 646 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 SLC6A20Q9NP91 592 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 PARD6AQ9NPB6 346 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 CUEDC1Q9NWM3 386 aaPredicted RBP10.61□□□□□ -0.71
TMEM260-208ENST00000555905 GEMIN8Q9NWZ8 242 aaKnown RBP10.61□□□□□ -0.71
TMEM260-208ENST00000555905 KLHL14Q9P2G3 628 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 ANKMY1Q9P2S6 941 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 EPHA6Q9UF33 1036 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 DCTN4Q9UJW0 460 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 TIMM22Q9Y584 194 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 PCDHGA11Q9Y5H2 935 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 DNAH14Q0VDD8 3507 aa10.61□□□□□ -0.71
TMEM260-208ENST00000555905 KCNE1BA0A087WTH5 132 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 A0A0G2JND7 137 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 C4orf47A7E2U8 309 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 H0YIV9 168 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 CAPN5O15484 640 aaPredicted RBP10.6□□□□□ -0.71
TMEM260-208ENST00000555905 MAP3K7O43318 606 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 B4GAT1O43505 415 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 TNFSF14O43557 240 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 ULK1O75385 1050 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 SKAP2O75563 359 aaPredicted RBP10.6□□□□□ -0.71
TMEM260-208ENST00000555905 PCNAP12004 261 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 CD59P13987 128 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 CKMT2P17540 419 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 CD22P20273 847 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 CDH3P22223 829 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 SERPINB1P30740 379 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 GRIA3P42263 894 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 AQP5P55064 265 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 PPP1CAP62136 330 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 YBX1P67809 324 aaKnown RBP10.6□□□□□ -0.71
TMEM260-208ENST00000555905 CSNK1G2P78368 415 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 PHEXP78562 749 aa10.6□□□□□ -0.71
TMEM260-208ENST00000555905 REEP5Q00765 189 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms