RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 NDOR1Q9UHB4 597 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 IKZF3Q9UKT9 509 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 FIS1Q9Y3D6 152 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 OARD1Q9Y530 152 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 ANGPTL3Q9Y5C1 460 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 KNL1Q8NG31 2342 aa6.64□□□□□ -1.35
SLIRP-204ENST00000555890 TMEM233B4DJY2 109 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 SDHDO14521 159 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 UBFD1O14562 309 aaKnown RBP6.63□□□□□ -1.35
SLIRP-204ENST00000555890 UBDO15205 165 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 SLC16A5O15375 505 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 MGRN1O60291 552 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 CDK14O94921 469 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 ESRRBO95718 433 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 DLGAP3O95886 979 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 SCGB1D2O95969 90 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 ALBP02768 609 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 ANXA5P08758 320 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 UROSP10746 265 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 COX4I1P13073 169 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 TSPAN8P19075 237 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 AOAHP28039 575 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 CCR7P32248 378 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 NTF4P34130 210 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 MAPK9P45984 424 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 CPA2P48052 419 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 PIK3CGP48736 1102 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 STX1BP61266 288 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 B4GALNT1Q00973 533 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 SQLEQ14534 574 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 NAA25Q14CX7 972 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 HERC3Q15034 1050 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 PCBP2Q15366 365 aaKnown RBP eCLIP6.63□□□□□ -1.35
SLIRP-204ENST00000555890 SNCBQ16143 134 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 IGFBP7Q16270 282 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 SYTL3Q4VX76 610 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 EXOSC6Q5RKV6 272 aaKnown RBP6.63□□□□□ -1.35
SLIRP-204ENST00000555890 WASHC2DQ5SRD0 308 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 HENMT1Q5T8I9 393 aaKnown RBP6.63□□□□□ -1.35
SLIRP-204ENST00000555890 BROXQ5VW32 411 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 KANK2Q63ZY3 851 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 SBSNQ6UWP8 590 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 SPNS3Q6ZMD2 512 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 CYHR1Q6ZMK1 362 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 GPRIN3Q6ZVF9 776 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 NEK10Q6ZWH5 1172 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 DET1Q7L5Y6 550 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 MMAAQ8IVH4 418 aaKnown RBP6.63□□□□□ -1.35
SLIRP-204ENST00000555890 DDIASQ8IXT1 998 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 TCAIMQ8N3R3 496 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 PDPRQ8NCN5 879 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 DDHD1Q8NEL9 900 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 BAHD1Q8TBE0 780 aaPredicted RBP6.63□□□□□ -1.35
SLIRP-204ENST00000555890 LKAAEAR1Q8TD35 194 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 MCOLN3Q8TDD5 553 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 CXorf40AQ8TE69 158 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 AGAP11Q8TF27 550 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 ASZ1Q8WWH4 475 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 ELMO1Q92556 727 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 PCSK5Q92824 1860 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 SCAMP4Q969E2 229 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 GLYATL1Q969I3 302 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 ATP6V1E2Q96A05 226 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 CHFRQ96EP1 664 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 DTD2Q96FN9 168 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 COQ10AQ96MF6 247 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 P2RY13Q9BPV8 354 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 WRAP53Q9BUR4 548 aaKnown RBP6.63□□□□□ -1.35
SLIRP-204ENST00000555890 CADM1Q9BY67 442 aaKnown RBP6.63□□□□□ -1.35
SLIRP-204ENST00000555890 FBRSQ9HAH7 460 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 PRSS16Q9NQE7 514 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 NDE1Q9NXR1 346 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 WWOXQ9NZC7 414 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 ADAMTS9Q9P2N4 1935 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 BAIAP2L1Q9UHR4 511 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 PCTPQ9UKL6 214 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 ITGB1BP2Q9UKP3 347 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 SARDHQ9UL12 918 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 TNRC6BQ9UPQ9 1833 aaKnown RBP6.63□□□□□ -1.35
SLIRP-204ENST00000555890 ZNF451Q9Y4E5 1061 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 STON1Q9Y6Q2 735 aa6.63□□□□□ -1.35
SLIRP-204ENST00000555890 LOC100653049A0A140TA62 436 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 A1L4Q6 167 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 LRRC14BA6NHZ5 514 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 FADS2P1A8MWK0 482 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 AREL1O15033 823 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 TMPRSS2O15393 492 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 NUAK1O60285 661 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 ADAM11O75078 769 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 ATG13O75143 517 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 CIB2O75838 187 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 KRT34O76011 436 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 AGFG2O95081 481 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 ATP6V1G2O95670 118 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 GUCA1CO95843 209 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 OTCP00480 354 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 JUNP05412 331 aaKnown RBP6.62□□□□□ -1.35
SLIRP-204ENST00000555890 GSTM1P09488 218 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 LBPP18428 481 aa6.62□□□□□ -1.35
SLIRP-204ENST00000555890 CYP2A7P20853 494 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms