RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 CHKBQ9Y259 395 aa2.75□□□□□ -1.97
SNX6-204ENST00000555541 RSF1Q96T23 1441 aaPredicted RBP2.75□□□□□ -1.97
SNX6-204ENST00000555541 A0A1W2PPM1 405 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 C2CD4DB7Z1M9 353 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 G3V2L1 256 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 SNAP91O60641 907 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 PORP16435 677 aaPredicted RBP2.74□□□□□ -1.97
SNX6-204ENST00000555541 CD27P26842 260 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 CAPGP40121 348 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 EIF2DP41214 584 aaKnown RBP2.74□□□□□ -1.97
SNX6-204ENST00000555541 CUL3Q13618 768 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 VEZF1Q14119 521 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 TRIM29Q14134 588 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 MEA1Q16626 185 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 RILPL1Q5EBL4 403 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 OR4A47Q6IF82 309 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 ZNF841Q6ZN19 808 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 CHMP1BQ7LBR1 199 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 FAM89BQ8N5H3 189 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 Q8N7P7 452 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 JAKMIP2Q96AA8 810 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 PTERQ96BW5 349 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 MOB3AQ96BX8 217 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 NAP1L4Q99733 375 aaKnown RBP2.74□□□□□ -1.97
SNX6-204ENST00000555541 SDF4Q9BRK5 362 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 HEXA-AS1Q9H8Q6 139 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 ANKZF1Q9H8Y5 726 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 PDE7BQ9NP56 450 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 TBC1D22BQ9NU19 505 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 MRPL15Q9P015 296 aaKnown RBP2.74□□□□□ -1.97
SNX6-204ENST00000555541 IL17BQ9UHF5 180 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 DDX25Q9UHL0 483 aaKnown RBP2.74□□□□□ -1.97
SNX6-204ENST00000555541 PA2G4Q9UQ80 394 aaKnown RBP2.74□□□□□ -1.97
SNX6-204ENST00000555541 ARID2Q68CP9 1835 aa2.74□□□□□ -1.97
SNX6-204ENST00000555541 A8MV72 311 aaPredicted RBP2.73□□□□□ -1.97
SNX6-204ENST00000555541 NPIPB9F8W1W9 429 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 K7EQD1 137 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 POP4O95707 220 aaKnown RBP2.73□□□□□ -1.97
SNX6-204ENST00000555541 PRB2P02812 416 aaPredicted RBP2.73□□□□□ -1.97
SNX6-204ENST00000555541 PAX3P23760 479 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 ELAVL4P26378 380 aaKnown RBP2.73□□□□□ -1.97
SNX6-204ENST00000555541 OXTRP30559 389 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 GEMIN4P57678 1058 aaKnown RBP2.73□□□□□ -1.97
SNX6-204ENST00000555541 UBXN2AP68543 259 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 TRAP1Q12931 704 aaKnown RBP2.73□□□□□ -1.97
SNX6-204ENST00000555541 SRSF9Q13242 221 aaKnown RBP eCLIP2.73□□□□□ -1.97
SNX6-204ENST00000555541 SGCGQ13326 291 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 TRA2AQ13595 282 aaKnown RBP eCLIP2.73□□□□□ -1.97
SNX6-204ENST00000555541 CUL4AQ13619 759 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 FAM189A2Q15884 450 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 GARNL3Q5VVW2 1013 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 CDHR3Q6ZTQ4 885 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 IL17RELQ6ZVW7 336 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 RAPH1Q70E73 1250 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 FCRLAQ7L513 359 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 SLC25A42Q86VD7 318 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 PHC2Q8IXK0 858 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 TSPAN14Q8NG11 270 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 EVI5LQ96CN4 794 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 ZNF830Q96NB3 372 aaPredicted RBP2.73□□□□□ -1.97
SNX6-204ENST00000555541 GPN1Q9HCN4 374 aaPredicted RBP2.73□□□□□ -1.97
SNX6-204ENST00000555541 LNPEPQ9UIQ6 1025 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 TSPAN16Q9UKR8 245 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 RNF150Q9ULK6 438 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 SELENOKQ9Y6D0 94 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 RPS6KL1Q9Y6S9 549 aa2.73□□□□□ -1.97
SNX6-204ENST00000555541 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.72□□□□□ -1.97
SNX6-204ENST00000555541 TRBV4-1A0A0J9YWV2 114 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 CASTOR2A6NHX0 329 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 SHISA9B4DS77 424 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 TRIM77I1YAP6 450 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 PTGESO14684 152 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 GP9P14770 177 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 MYOGP15173 224 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 LHX1P48742 406 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 CLCN4P51793 760 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 CLNS1AP54105 237 aaKnown RBP2.72□□□□□ -1.97
SNX6-204ENST00000555541 FCHO2Q0JRZ9 810 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 STK4Q13043 487 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 ZNF177Q13360 481 aaPredicted RBP2.72□□□□□ -1.97
SNX6-204ENST00000555541 MS4A18Q3C1V0 323 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 FAM166AQ6J272 317 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 C3P1Q6ZMU1 363 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 Q6ZVH6 145 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 DNAAF5Q86Y56 855 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 FGFRL1Q8N441 504 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 PIK3R3Q92569 461 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 CHCHD5Q9BSY4 110 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 PRRG4Q9BZD6 226 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 OLAHQ9NV23 265 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 HAO2Q9NYQ3 351 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 SLC24A2Q9UI40 661 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 PRDM4Q9UKN5 801 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 ELF5Q9UKW6 265 aaPredicted RBP2.72□□□□□ -1.97
SNX6-204ENST00000555541 PPIEQ9UNP9 301 aaKnown RBP2.72□□□□□ -1.97
SNX6-204ENST00000555541 TMEM5Q9Y2B1 443 aa2.72□□□□□ -1.97
SNX6-204ENST00000555541 IGSF1Q8N6C5 1336 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 IGLV4-3A0A075B6K6 122 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 A0A1W2PPK0 400 aa2.71□□□□□ -1.98
SNX6-204ENST00000555541 NXPH4O95158 308 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms