RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 DUSP7Q16829 419 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 LYPLAL1Q5VWZ2 237 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 TPGS2Q68CL5 300 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 CXorf57Q6NSI4 855 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 LETMD1Q6P1Q0 360 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 FAHD1Q6P587 224 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 SCIMPQ6UWF3 145 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 TAS1R1Q7RTX1 841 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 GALNT12Q8IXK2 581 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 PIANPQ8IYJ0 282 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 SYTL1Q8IYJ3 562 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 EFHBQ8N7U6 833 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 EEF1AKMT1Q8WVE0 214 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 PYCR2Q96C36 320 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 COPS4Q9BT78 406 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 P2RY12Q9H244 342 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 KRT84Q9NSB2 600 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 EIF2B4Q9UI10 523 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 PSORS1C1Q9UIG5 152 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 UTS2RQ9UKP6 389 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 PNMA8BQ9ULN7 279 aaPredicted RBP10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 BTBD3Q9Y2F9 522 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 CCL27Q9Y4X3 112 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 MAU2Q9Y6X3 613 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 NT5C1B-RDH14C9J2C7 533 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 PITPNM1O00562 1244 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 FZD6O60353 706 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 MFN2O95140 757 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 PGLSO95336 258 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 EFEMP2O95967 443 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 MYCP01106 439 aaPredicted RBP10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 SEMG1P04279 462 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 CDK1P06493 297 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 HMGA1P17096 107 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 GADD45AP24522 165 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 GTF2E2P29084 291 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 HOXA9P31269 272 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 OR1D2P34982 312 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 CDKN1CP49918 316 aaPredicted RBP10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 AP1S1P61966 158 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 TAF12Q16514 161 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 FAM174BQ3ZCQ3 159 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 ERICH5Q6P6B1 374 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 SYCE2Q6PIF2 218 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 DNAJC14Q6Y2X3 702 aaPredicted RBP10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 AHSA2Q719I0 299 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 RAB43Q86YS6 212 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 REM2Q8IYK8 340 aaPredicted RBP10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 CRIPAKQ8N1N5 446 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 NETO1Q8TDF5 533 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 ST6GAL2Q96JF0 529 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 RIPOR3Q96MK2 946 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 COL21A1Q96P44 957 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 TRAF4Q9BUZ4 470 aaPredicted RBP10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 GON7Q9BXV9 100 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 IKZF5Q9H5V7 419 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 DDX28Q9NUL7 540 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 IL17CQ9P0M4 197 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 KIF17Q9P2E2 1029 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 LHX3Q9UBR4 397 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 TSPAN3O60637 253 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 FABP3P05413 133 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 DBTP11182 482 aaKnown RBP10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 ZNF7P17097 686 aaPredicted RBP10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 RRM2P31350 389 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 HMGCLP35914 325 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 RGS4P49798 205 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 CLCN7P51798 805 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 HK3P52790 923 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 RHOAP61586 193 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 NPRL3Q12980 569 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 VEPH1Q14D04 833 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 CARTPTQ16568 116 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 RFTN2Q52LD8 501 aaPredicted RBP10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 CARD16Q5EG05 197 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 LHX8Q68G74 356 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 SIGIRRQ6IA17 410 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 ZCCHC8Q6NZY4 707 aaKnown RBP10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 XKRXQ6PP77 449 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 ZNF517Q6ZMY9 492 aaPredicted RBP10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 GCNT7Q6ZNI0 430 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 TRIM46Q7Z4K8 759 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 GALNT5Q7Z7M9 940 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 SERPINA11Q86U17 422 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 PEX5LQ8IYB4 626 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 CELF2-AS1Q8N7Q2 184 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 HJURPQ8NCD3 748 aaPredicted RBP10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 OR52B6Q8NGF0 335 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 RAET1EQ8TD07 263 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 ITCHQ96J02 903 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 GDF15Q99988 308 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 ZBED2Q9BTP6 218 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 GPR63Q9BZJ6 419 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 REXO4Q9GZR2 422 aaKnown RBP10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 CLPBQ9H078 707 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 ZFP14Q9HCL3 533 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 QPCTLQ9NXS2 382 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 VNN3Q9NY84 501 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 U3KQV3 271 aa10.37□□□□□ -0.75
MTHFD1-210ENST00000555252 ALPK3Q96L96 1907 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms